| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0192 |
|---|
| Symbol | |
|---|
| ID | 4846002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 173298 |
|---|
| End bp | 176288 |
|---|
| Gene Length | 2991 bp |
|---|
| Protein Length | 996 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640114862 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001046108 |
|---|
| Protein GI | 126178143 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1216] Predicted glycosyltransferases
[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCGA TTTACGAAGA ACACCGCTCA ACCAGGTACG AACCGCCGGT TATCGACCTG
AAAAATAAAA ACAGCAGTCA GGTCCTCCTG ATCGAACTTA CCGGCAGGAA TAAAGATGTC
CTTGAGGTCG GCACGTCCAC CGGCTACGTC AGCCGGGTCC TTAAAGAGCG GGGGAATACC
GTCACCGGCA TCGAGATTGA CCCGGAAGCC GGCGAGATTG CCGGGCAGCA CTGTGATTCG
ATGATCGTCG GGGATATCGA GAAACTTGAC CTCGATGCCT ACCTTGCTCC CTCTTCCTTC
GACGTGATCA TCTTCGGGGA TGTTCTGGAG CACCTGGCCT CCCCGGAGGA TGTGCTCAGG
AAGGTGAAGA AGTATCTCCG GCCGGATGGG TACCTGGCCG TATCTCTGCC GAACGTCTGC
CATGGGGACG TCATCTTAAA CCTGCTCATG GGTGACTTCA AGTATACCTC GATGGGGCTT
CTGGACGCCA CCCACTTGCG CTTTTTCGGA CTCAGGAATA TCATTGATCT CTTTAGCCGT
TGTGGTTACT CTATAACCGG TCTTCATACG ACTGTATTCC CTGTAGGGGG AACCGAACAG
AGGCTTGATC CCGGGGTTGT TCCGGAAGAT CTTGCCAACT TTGTGAAGTC GCTTCCGAAT
TCCAGTGTTT ATCAGTATAT TTTTAAAGCA AGCCCTTCCC CTACCCCGGA AGCGGTGGAG
GCAGTTCCTG CGCCGGATCT TGATGGTCTG TTTCGCGGGG CCATCGAGGG GAGTATTCAG
GCTGAAATTA AACCTTTGCT GGAAGAACTT AGCGCATACG AAGTACGCAC GGTCTCGCTC
GCTGAACAGG TCGAGCAGTT GACAGAGGAA ACTCAGTCGT TGCAGGTGAC TATCTCGGAG
CGTGATGCAC AGATTGCTTC GCTTGACGGG CAGGTCGAAC AGTTGACAGG GGAAACTCAG
TCGTTGCAGG TGACTATCTC GGGGCGTGAT GGACAGATTG CTTCACTCAA TGAGCAGACC
CGACAACAGG CAATTCAGCT GATGCAATTG TCCAACGAGC TCGCCAGTAT GAAGCAAAGT
GTCGTGTGGC GGCTGTTGAT GAAATTTCAT AACGGTTTTG TCGAGAGGGC TCTTCCACAA
AATACCCGCA GGAGAAGGCT ATACGACCTT GGGTTAGTTG GATTAAGAGT TCTTATACAC
GAAGGGCCCA GAGGCCTTCG GATTCGGGGA GAAAAAAAGT TGCGAGGTGA ATCTCCGAGT
CGATTGTTGC AGTCATCCAA ATCGTCGATT GCAATGGATA AAAATAATAA GTATCAGTTG
ATACCTGGAA CAACTGATTA TGTATATATC CCACCTCGAT GTCCAAATAA TATCAACAGT
ATTATCGAAT CGATGGCGTA TAAACCACAT TTTTCGATTG TGGTTCCTGT ATACAACACC
CCACCAGACT TGTTAAATAA GGCAGTGAGA TCTCTACAAC TGCAGTGGTA TCCCCATTGG
GAACTGATAC TTGTTGATGA TGCAAGCCCG TCTAAAGAAA CTAAACGCTG CCTCAGCAAA
ATCAATGATC CCAATATCAA AGTATTCACT CACCCTCAGA ATAAAGGGAT ATCTGGCGCC
ACGAACACAG CAATAAGCCA CTCAACCGGA GATTATGTCG TTCTGCTCGA TCACGATGAT
GAATTGACGG AAGACTGTCT TTTCGAACTG GCATTATGCA TTAATCGAGA CGATCCTGAT
TATATCTATA GCGATGAAGA CAAAATCGAT GAGAAAGGTT ATTTCACAGA ACCTCATTAT
AAACCGGACT GGTCACCCGA CACCATGATG AGCACAATGT ACGTGTGCCA CGTCTCCTGT
ATCAAGAAGA GTCTATTGGA AGAAGTTGGA GGCTTACGCT CTGATTATGA CGGATGCCAG
GATTGGGATC TGATTCTTCG TATTGTTGAA AAGACAGATA GGATTAGCCA TATTCCTAAA
GTTCTCTATC ACTGGCGAAT CATACCGGGT TCGACGTCTG CGGACATTGG AGCAAAATCC
TATGTTCTCG ACGCCTCCAG AAGAGTCCGT GAGGATGCGC TTAAGCGTCG GGGATTACTT
GGGACGGTCG AGCCATTGGA GCAAGTTAAC GGCTATTTCC GGGTGAACTA CCATCTGGTA
GACAAGCCGC TGATCTCGAT TATTATCCCA ACTCGGGACC ATGGAGATGT ACTTCGCCGC
TGCATTGAAT CGATATTTAA AAAATCTACC TATAAGAATT TTGAATTAAT TGTGCTGGAT
AATGGATCCG TCGATTCTGC CACATTAGAA TATCTGGAGG AAATAAAGGC TGAACCAAAC
ATCTCTGTGA TTCGTCACGC GGAACCGTTT AATTACTCGG AACTGAATAA TGTCGGGGCA
GATTTTGCAA AAGGGGAGAT CCTTCTTTTC CTGAATGATG ACACGGAGGT AGTTACTTCT
GACTGGCTTG AAAGGATGGG AGGTTATGCG CAACTTGCAC ATATCGGGGC TGTGGGTGCC
AAACTTCTGT ATCCGGGTGG AAAGAAGATC CAACATGCAG GAGTTCTCAA TCTGCAAGAT
GGTCCAGGTC ATGCATTCCT TCACCAAAAT GCGGACCTCC CGGGTTATTA CTTGCGTAAT
CTCATAGAAT ATAACTGGCT TGCGGTGACG GGTGCGTGTT TAATGATTGA GAGAAAAAAA
TTTCAGTCGG TCAATGGGTT TGATGTAAAT TACCCTATCG CGTACAATGA CGTTGATCTC
TGTTTCCGGT TAAGAGATGC GGGTTTTTAC AATCTAGTTT CTCAATCAGT CAGACTTATT
CATCATGAAT CTTTAACCCG GAGGATGGAT CACGCTGACC ATGATAAAAC GGAGAGACTC
AAGCAGGATA TGCGCAGGCT TTATCAAAAG CATCCTTTCT ACTACCAATA TGACCCATTT
TACAGTATAA ATTTACATCC GAACGGCATC AATTTTGAAA CTTTCAGGTG A
|
|---|
| Protein sequence | MSPIYEEHRS TRYEPPVIDL KNKNSSQVLL IELTGRNKDV LEVGTSTGYV SRVLKERGNT
VTGIEIDPEA GEIAGQHCDS MIVGDIEKLD LDAYLAPSSF DVIIFGDVLE HLASPEDVLR
KVKKYLRPDG YLAVSLPNVC HGDVILNLLM GDFKYTSMGL LDATHLRFFG LRNIIDLFSR
CGYSITGLHT TVFPVGGTEQ RLDPGVVPED LANFVKSLPN SSVYQYIFKA SPSPTPEAVE
AVPAPDLDGL FRGAIEGSIQ AEIKPLLEEL SAYEVRTVSL AEQVEQLTEE TQSLQVTISE
RDAQIASLDG QVEQLTGETQ SLQVTISGRD GQIASLNEQT RQQAIQLMQL SNELASMKQS
VVWRLLMKFH NGFVERALPQ NTRRRRLYDL GLVGLRVLIH EGPRGLRIRG EKKLRGESPS
RLLQSSKSSI AMDKNNKYQL IPGTTDYVYI PPRCPNNINS IIESMAYKPH FSIVVPVYNT
PPDLLNKAVR SLQLQWYPHW ELILVDDASP SKETKRCLSK INDPNIKVFT HPQNKGISGA
TNTAISHSTG DYVVLLDHDD ELTEDCLFEL ALCINRDDPD YIYSDEDKID EKGYFTEPHY
KPDWSPDTMM STMYVCHVSC IKKSLLEEVG GLRSDYDGCQ DWDLILRIVE KTDRISHIPK
VLYHWRIIPG STSADIGAKS YVLDASRRVR EDALKRRGLL GTVEPLEQVN GYFRVNYHLV
DKPLISIIIP TRDHGDVLRR CIESIFKKST YKNFELIVLD NGSVDSATLE YLEEIKAEPN
ISVIRHAEPF NYSELNNVGA DFAKGEILLF LNDDTEVVTS DWLERMGGYA QLAHIGAVGA
KLLYPGGKKI QHAGVLNLQD GPGHAFLHQN ADLPGYYLRN LIEYNWLAVT GACLMIERKK
FQSVNGFDVN YPIAYNDVDL CFRLRDAGFY NLVSQSVRLI HHESLTRRMD HADHDKTERL
KQDMRRLYQK HPFYYQYDPF YSINLHPNGI NFETFR
|
|---|
| |