Gene Mbur_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1213 
Symbol 
ID3998537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1300748 
End bp1303972 
Gene Length3225 bp 
Protein Length1074 aa 
Translation table11 
GC content44% 
IMG OID637958979 
ProductHsdR family type I site-specific deoxyribonuclease 
Protein accessionYP_565885 
Protein GI91773193 
COG category[V] Defense mechanisms 
COG ID[COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID[TIGR00348] type I site-specific deoxyribonuclease, HsdR family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT CCGCCATTGA GGAATTCGCC ATCGAACTCC TCGAACATCA GGGCTACCAG 
TATATCTATG CCCCGGACAT TACCCCGGAT AGCGACACTC CGGAACGGGA ACGGTTTGAA
GATGTACTAT TATCAGAGCG CCTGCGAAAA TCCATTGGCA GGATCAATCC CACTATTCCG
GCAGATGCGC GGGAGGACGC CATCAGGCAG ATACAGCGCC TTAATTCGCC TGAACTTATC
GCCAACAACG AGGCATTTCA CAGGATGCTT ACCGAGGGCA TAAAGGTAAG TTATCAGAAA
GACGGAGCCG ACAGGGGCGA TCTGGTCTGG CTCGTAGATT TTAACGATCC TGAAAACAAC
GAATTTCTTG TCACCAATCA ATTCACTGTC ATTGAAAATA ATGTGAACAA ACGGCCTGAT
ATCATCCTTT TTGTTAACGG TCTGCCCCTG GTGGTTATCG AGCTGAAAAA CCCTGCTGAC
GAGAACGCAA CCGTAAGATC TGCATTCAGA CAGTTGCAGA CCTACAAACA GGCAATTTCA
TCTTTGTTTG CCTATAATGG TTTCATGGTC ATCTCCGATG GTCTGGAGGC AAAATCAGGT
TCTCTTTCCG CTGGTTTCAG CCGTTTTATG GCATGGAAAA GCTCAGACGG CACGGTTGAA
GCCTCGCCTT TAATTGGTCA GTTGGAAACA CTCATTAACG GGATGCTGAA TAAAACAACT
CTCTTGGATC TTGTCCGGCA TTTCATTGTA TTTGAAAAAT CGAAAAAGGA AGACAGGACA
ACCGGCATTA TAACTATTCA GACTGTAAAG AAACTCGCTA CCTATCATCA GTACTATGCC
GTTAACCGGG CGGTAGAATC GACACTCAGG GCATCGGGTT ATGCTGCGGC GAAAGACTGG
CAAATTTTCG GTCTACATCA TGAGAGTCCC GAAAGTTATG GCTTGCCCGG GGTGACAGAA
CAACCCATTG GAGACAGAAA AGGCGGCGTG GTCTGGCATA CACAGGGAAG TGGTAAATCC
CTTTCCATGG TTTTCTACAC CGGTAAGATC GTCCTGGCAA TGGATAACCC CACCGTAGTT
GTGATCACTG ACAGAAACGA CCTGGACGAC CAGCTTTTTG ATACCTTTGC CGCTTCAAAG
CAACTTCTCA GGCAGGAACC TGTGCAGGCA GAAAACAGGG GGCATTTGAA AGAACTGCTA
AACGTTGCAT CGGGTGGCGT GGTATTTACC ACCATCCAGA AATTCCAGCC CGAAGAAGGG
AACGTTTACC CGAAACTATC GGACAGGAGA AATATCATTG TGATAGCTGA CGAAGCCCAC
CGGACACAAT ACGGCTTCAA GGCAAAAACC ATTGATATCA AGGATGAACA GGGAAACGTA
ATCGGTCAAA AGATCGTTTA CGGTTTTGCG AAATACACAC GCGACGCCCT GCCCAACGCA
ACTTACCTGG GTTTCACCGG TACGCCAATA GAAAAAACAG ACGTGAACAC GCCTGCTGTT
TTTGGCAATT ATGTTGACAT TTATGATATA TCCCAGGCTG TTGAGGACGG CGCCACGGTA
AAAATCTATT ACGAAAGCAG GTTGGCAAAA ATCATTCTCA GCAAGGAAGG TAAAAAACTG
GTCTCAGAAC TGGATGAAGA ACTGGAAAAA GAAAATCTTG CAGAAACCCA GAAAGCCAAA
GCTAAATGGA CACAACTGGA AGCCTTGATC GGCAGTGAAG GCCGAATAAG GCAGATCGCA
CAGGATATTG TAACTCATTT CGAGCAAAGA AAGGAAGTGT TCGAAGGCAA GGGAATGATC
GTTGCAATGT CACGAAGGAT AGCCGCTGAC CTGTACGATG AAATTATCAA GATCAAGCCG
CAATGGCACA ACGATGACTT TAAAAAAGGC GAAATCAAGA TTGTGATGAC CTCTGCATCT
TCTGACGGGC CCAAAATATC AAAACATCAT ACGACAAAAG AGCAGAGAAG AGCTTTAGCA
GAACGGATGA AAGACCCGGA AGACGAATTG AAACTGGTCA TCGTTCGGGA CATGTGGCTA
ACGGGTTTTG ATGTTCCATG TCTGCATACG ATGTACATTG ACAAGCCAAT GAAAGGGCAT
ACCCTTATGC AGGCAATTGC GCGGGTGAAC AGAGTCTATA AAGACAAACC AGGTAGTCTG
GTTGTTGATT ATCTGGGAAT AGCTTCTGAC CTGAAAGAAG CCTTGTCTTT CTATTCTGAC
AGCGGCGGGA AAGGCGATCC TGCTGTCCTT CAGGAGAGTG CAGTTCAATT GATGCTGGAG
AAACTGGAGA TCGTATCCCA GATGTTTCAT GGATTTTCCT ACGAACATTA CTTTGCAGCG
GATACTTCTA CGAAGTTGTC AATAATACTT GCAGCAGAAG AACATATTCT GGGTCTCGAA
AACGGTAAAA AAAGGTACAT CGATGAAGTA ACTGCATTAT CAAGAGCATT TTCCATAGCC
ATTCCACACG AGGAGGCAAT GGATGTGAAG GATGAAATCT CGTTTTATCA AGCGATAAAA
GCCAGACTTG TTAAATTTGA CAGCACTGGA ACAGGTAAAA CAGACGAGGA GATTGAAACT
GCAATCAGAC AGGTTATCGA TCAGGCCCTT GTTACTGAAC AAGTGATAGA CGTGTTTGAT
GCCGCAGGAA TTAAAAAACC GGACATTTCC ATATTATCAG AAGATTTTCT TTTAGAAGTC
CAGAACATGG AACACAAAAA TATAGCTCTG GAAGTTCTAA AAAAGTTGCT CAACGATGAA
ATAAAAGCCC GGGTAAAGAA GAACCTCGTT CAAAGCAAAT CATTAATGGA AATGCTGGAA
GATTCCATCA AGAAATATCA TAACAAAGTT ATAACTGCGG CTGAAGTCAT TGAAGAATTG
ATTGAACTCA GTAAAGAGAT AAAACGGATG GACAAAGAAC CTTTAGAGAT GGGTTTGTCT
GAATTTGAAT ATGCGTTTTA CACAGCAATC GCAGATAATG ACAGTGCAAG AGAATTGATG
CAAAAAGAGA AGTTACGGGA ACTAGCGGTT GTTTTATTTG ATAAAATCAA ACAAAACGCG
TCTATAGACT GGACGATTAA AGAAAGCGTC AGGGCCAAAT TAAAAGTAAT TGTAAAACGG
ACATTAAGAC AATATGGCTA TCCGCCGGAT CTACAAGCAC TCGCTACAGA AACAGTGCTT
AAGCAGGCGG AATTGATCAC CGATGAAATA ACAAAGGGTG TTTGA
 
Protein sequence
MTESAIEEFA IELLEHQGYQ YIYAPDITPD SDTPERERFE DVLLSERLRK SIGRINPTIP 
ADAREDAIRQ IQRLNSPELI ANNEAFHRML TEGIKVSYQK DGADRGDLVW LVDFNDPENN
EFLVTNQFTV IENNVNKRPD IILFVNGLPL VVIELKNPAD ENATVRSAFR QLQTYKQAIS
SLFAYNGFMV ISDGLEAKSG SLSAGFSRFM AWKSSDGTVE ASPLIGQLET LINGMLNKTT
LLDLVRHFIV FEKSKKEDRT TGIITIQTVK KLATYHQYYA VNRAVESTLR ASGYAAAKDW
QIFGLHHESP ESYGLPGVTE QPIGDRKGGV VWHTQGSGKS LSMVFYTGKI VLAMDNPTVV
VITDRNDLDD QLFDTFAASK QLLRQEPVQA ENRGHLKELL NVASGGVVFT TIQKFQPEEG
NVYPKLSDRR NIIVIADEAH RTQYGFKAKT IDIKDEQGNV IGQKIVYGFA KYTRDALPNA
TYLGFTGTPI EKTDVNTPAV FGNYVDIYDI SQAVEDGATV KIYYESRLAK IILSKEGKKL
VSELDEELEK ENLAETQKAK AKWTQLEALI GSEGRIRQIA QDIVTHFEQR KEVFEGKGMI
VAMSRRIAAD LYDEIIKIKP QWHNDDFKKG EIKIVMTSAS SDGPKISKHH TTKEQRRALA
ERMKDPEDEL KLVIVRDMWL TGFDVPCLHT MYIDKPMKGH TLMQAIARVN RVYKDKPGSL
VVDYLGIASD LKEALSFYSD SGGKGDPAVL QESAVQLMLE KLEIVSQMFH GFSYEHYFAA
DTSTKLSIIL AAEEHILGLE NGKKRYIDEV TALSRAFSIA IPHEEAMDVK DEISFYQAIK
ARLVKFDSTG TGKTDEEIET AIRQVIDQAL VTEQVIDVFD AAGIKKPDIS ILSEDFLLEV
QNMEHKNIAL EVLKKLLNDE IKARVKKNLV QSKSLMEMLE DSIKKYHNKV ITAAEVIEEL
IELSKEIKRM DKEPLEMGLS EFEYAFYTAI ADNDSARELM QKEKLRELAV VLFDKIKQNA
SIDWTIKESV RAKLKVIVKR TLRQYGYPPD LQALATETVL KQAELITDEI TKGV