Gene Mboo_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1788 
Symbol 
ID5410104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1870116 
End bp1870625 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content56% 
IMG OID640869023 
ProductBioY protein 
Protein accessionYP_001404947 
Protein GI154151329 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.385852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCG ATCTCGCACG CTCACGCCGC GTTGCATATA CAGCGGCCTT TATTGGACTT 
ATCACTCTTG GAGGGTGGAT ATCAGTTCCG TTTATCCCCG TCCCCTTTAC CCTCCAGACA
TTTTTTGTCC TGCTCGCAGC AGCGGTGATG AAGCGCGACG CCGTCATCCC GGTCACCCTG
TATGTAGTAC TGGGTGTGCT CGGGCTGCCT GTTTTCCACA ATGGCGTAGC AGGAATGGGT
ATCCTTCTGG GGCCGACGGG AGGATATCTT GTCGGTTTTA TCCTGGCAGT TCTGGTTTCC
GGCTTTGCGT ATGAATCCGG CAAGGCTGTG ATCCGGATTG CCGGGCTTGC CAGCGGCGAT
CTGCTCATTC TTCTCTGTGG GATGGCATGG CTGATCGTTT CCACGGGCAT GGCCCCGGCT
GCGGCATTTG TCCTTGGACT GGCAGTTTTT ATTCCCGGTG AAGCGGTGAA GGTGGGTGCA
GTCTACTACC TTGGCCGGGA CTTGTCATGA
 
Protein sequence
MFGDLARSRR VAYTAAFIGL ITLGGWISVP FIPVPFTLQT FFVLLAAAVM KRDAVIPVTL 
YVVLGVLGLP VFHNGVAGMG ILLGPTGGYL VGFILAVLVS GFAYESGKAV IRIAGLASGD
LLILLCGMAW LIVSTGMAPA AAFVLGLAVF IPGEAVKVGA VYYLGRDLS