Gene Mboo_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1604 
Symbol 
ID5412199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1676506 
End bp1679097 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content54% 
IMG OID640868838 
ProductATPase 
Protein accessionYP_001404764 
Protein GI154151146 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.194925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA ACAATTTCAC CATCAAATCG CAGGAAGCCG TTTCAAAGGC GATAGAATTA 
GCAACGGCAA AAAAGAACCC GTCTGTCGAG ACGTCGCACC TCCTCAAGGG AATGCTCCTG
GTTGACGAGA ATGTCATCCC GTACCTCCTC AAGAAACTCA ATGTGGACCT CAACGGGTTT
ACTCCTGCGC TCGACCGGAT TATCGATGCG TATCCCGAGG TGACCGGCGG GGATCAGCAC
CTCTCCAGTG ATGCCACAAA AGCCCTGCAG AAAGCCACCG CACTTTCCCA GGAGTCCGGG
GATGAATTCG TTTCCCTGGA ACAGATCCTC CTTGGGATCC TTTCGGTAGA CAACAGCACC
TCACGGCTGC TCAAAGAGAA CGGGGTAAAG GAAAAAGATC TCAAGACTGC CATTGGCCAG
TTGCGGAAAG GTGAGACCGT GAACAACCAG AATGCCGAAG AGACCTACAA TGCCCTGGAA
AAATATGCCC GGAACCTCAA CGATCTTGCC CGCAAGGGAA AACTCGATCC GGTGATTGGC
CGTGACGAAG AGATCCGCCG GGTACTGCAG ATCCTTTCAC GGAGAACAAA GAACAACCCG
ATCCTCATCG GGGAACCCGG GGTGGGAAAG ACAGCGATCG CTGAAGGTAT CGCCCACCGG
ATCATCGATG AGGATGTCCC GGATAACCTG AAGACCAAGC AGATCTTTTC CCTTGATATG
GGAGCCCTGA TCGCCGGGGC CAAGTTCAAG GGAGAATTTG AAGAGCGGCT GAAAAGCGTA
GTCAAGGAAG TGACCTCATC TGACGGGGAA ATTATCCTCT TCATCGACGA GATCCACACC
CTGGTCGGGG CCGGTGGCGG CGAGGGTGCG ATGGATGCGG CAAATATCCT CAAGCCGGCG
CTCTCACGCG GAGAACTGCA TGTCATCGGC GCAACAACCT TAAAGGAATA CCAGAAGTAT
TTCGAGAAGG ACAAGGCGCT TGAGCGACGA TTCCAGCCGG TGATGGTCAA CGAACCGGAT
ATGCAGGACG CCATCTCCAT CCTCCGGGGC ATCAAGGAGA AGTACGAAAC CCACCACCAT
GTGCGGATCA AGGACGAGGC GATTATCGCC GCCGTTGAAC TGTCGCAGCG GTACATCTCC
GACCGGTTCC TCCCCGACAA GGCGATCGAC TTAATCGACG AGGCTGCATC AAAACTCCGG
CTGGAAATTA ACTCAAAACC GGAAGAACTC GAAAAAATTG AACGGAAGAT CCACCAGCTG
GAGATTGAAC GGGAAGCGAT CAAACGCGAG AAAGACCAGC AGAAGCTCAA GGCCTTAAAT
GAAGAGATCG GGAACCTGAC CGAGGAACGC AACCGGCTGA ATGCAAAGTG GCGGTCGGAA
AAAGAGCTTG TCGAGCAGAT CCAGTCACGG AAGACCGAGA TCGAGGACTT AAAGTTCGAG
GCCGAACGTG CCGAAAGGAA CGGCGACCTC GGGAAAGTTG CCGAGATCCG TTATGGCCGT
ATCCCGGATA ATGAAAAAAG CATGGTGGCG TTAAAGGAAA AACTCACCGT GCTGCAGAAG
GATTCCGCGC TCGTGAACGA AGAGGTGGAT GCCGAAGAGA TCGCCGAAGT TGTTTCGCGC
TGGACCGGGA TTCCCGTAAG CAGGATGCTC CAGAGCGAAA GGGAAAAACT GCTCAGCCTC
GAAGCCGAAC TCCACAAGCG TGTTGTCGGC CAGGATGAGG CCATCGCGGC AGTATCCAAT
GCGATCCGCC GGAGCCGTGC CGGGCTGCAG GACACAAAAC GCCCGATTGG CTCGTTTATC
TTCCTTGGCA CAACCGGTGT AGGAAAGACG GAACTCGCCA AAGCGCTCGC AGAATTCCTG
TTCAACAACG AGAACAGCAT GGTGCGGATC GATATGTCGG AGTACCAGGA ACGGCATACC
GTGTCAAGAC TGATCGGCGC ACCGCCGGGC TACGTTGGCT ATGAAGAGAG CGGGCAGCTG
ACCGAAGCGG TCCGGAGAAA GCCCTACTCA GTGGTACTGC TGGACGAGAT AGAAAAAGCC
CACCCGGATG TCTTTAACAT CCTCCTGCAG GTCCTTGACG ACGGCCGCCT GACCGATAAC
AAGGGCCGCA CGGTGGATTT CAAGAACACC ATCATCATCA TGACCTCGAA CATCGGGTCG
CACCTCATCC AGGAGAACAT GGAAAAAGCC ACCGAGAAGG ACAGGGACGA GCTCTTTGAG
CGCACGCGGG AACAGGTCTT TGACCTGCTC AAGAAGACCA TCCGTCCTGA ATTCCTCAAC
CGGATCGACG AGATCATTAT GTTCAAACCG CTCACGGAGG ATGAGATCCG GACGGTTGTT
GAGATCCAGC TGGAGGGCGT TCAGAAGATG CTTGAAAAGA GCGATGTCCG GCTCACGGCC
ACAAAGAAAG CCATCCGGTT TATCGCCGCC CTGGGCTTTG ACCCGCAGTT CGGAGCACGG
CCCATCAAAC GCGTGATCCA GAAAAACCTG CTCAATGAAT TGTCAAAGAT GATCCTCGAA
GGAAAAGTGC AGAAGGACAA GGAGATCGTG GTTGATGAGA AAGGAGGAAA ACTGGTGTTC
GGGAATGCCT GA
 
Protein sequence
MNFNNFTIKS QEAVSKAIEL ATAKKNPSVE TSHLLKGMLL VDENVIPYLL KKLNVDLNGF 
TPALDRIIDA YPEVTGGDQH LSSDATKALQ KATALSQESG DEFVSLEQIL LGILSVDNST
SRLLKENGVK EKDLKTAIGQ LRKGETVNNQ NAEETYNALE KYARNLNDLA RKGKLDPVIG
RDEEIRRVLQ ILSRRTKNNP ILIGEPGVGK TAIAEGIAHR IIDEDVPDNL KTKQIFSLDM
GALIAGAKFK GEFEERLKSV VKEVTSSDGE IILFIDEIHT LVGAGGGEGA MDAANILKPA
LSRGELHVIG ATTLKEYQKY FEKDKALERR FQPVMVNEPD MQDAISILRG IKEKYETHHH
VRIKDEAIIA AVELSQRYIS DRFLPDKAID LIDEAASKLR LEINSKPEEL EKIERKIHQL
EIEREAIKRE KDQQKLKALN EEIGNLTEER NRLNAKWRSE KELVEQIQSR KTEIEDLKFE
AERAERNGDL GKVAEIRYGR IPDNEKSMVA LKEKLTVLQK DSALVNEEVD AEEIAEVVSR
WTGIPVSRML QSEREKLLSL EAELHKRVVG QDEAIAAVSN AIRRSRAGLQ DTKRPIGSFI
FLGTTGVGKT ELAKALAEFL FNNENSMVRI DMSEYQERHT VSRLIGAPPG YVGYEESGQL
TEAVRRKPYS VVLLDEIEKA HPDVFNILLQ VLDDGRLTDN KGRTVDFKNT IIIMTSNIGS
HLIQENMEKA TEKDRDELFE RTREQVFDLL KKTIRPEFLN RIDEIIMFKP LTEDEIRTVV
EIQLEGVQKM LEKSDVRLTA TKKAIRFIAA LGFDPQFGAR PIKRVIQKNL LNELSKMILE
GKVQKDKEIV VDEKGGKLVF GNA