| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0959 |
|---|
| Symbol | |
|---|
| ID | 5412136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 943426 |
|---|
| End bp | 945627 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640868185 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_001404120 |
|---|
| Protein GI | 154150502 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.209132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.954436 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATG ACAGCACGTG CCCGGTAACG GGCGGGGCAG ACAAACAGGT GACCGGACGC
GGCCAGTCCT ACCGGGACTG GTGGCCAAAC CAGCCAAACC TGAGGGTTCT TTCGCAGCAC
TCACCCCGGT CAAACCCGAT GGGCGGAGAG TTCAACTATG CAGAGGAGTT CAAAAAACTC
GACTTTGCGG CAGTAAAGGC AGACCTGCGG GCGCTTATGA CCTCATCGCA GGAATGGTGG
CCGGCGGATT TTGGCCATTA CGGCCCCCTC TTTATCCGCA TGGCATGGCA CAGCGCCGGT
ACGTACCGCA CCCTTGACGG CCGCGGCGGC GCCGGTTCCG GCCAGCAGCG TTTCCCCCCC
TTGAACAGCT GGCCCGACAA CGTTAACCTG GACAAGGCGC GCCGGCTGCT CTGGCCCATA
AAAAAGAAGT ACGGCAGGAA AATCTCCTGG GCCGACCTCA TGATCCTTGC CGGTAATGTC
GCGCTCGAAT CCATGGGCTT TGAGACGTTC GGCTTTGCCG GTGGCCGCGT GGATACGTGG
GAGCCCGACG AGGATGTGTA CTGGGGTTCA GAGAACACGT GGCTCGGTGA CAAACGCTAC
TCCGGCGACC GGAAGCTCGA AAATCCGCTC GCTGCCGTAC AGATGGGGCT CATCTACGTA
AACCCCGAGG GTCCCAATGG CAAGCCGGAC CCGGTTGCGG CAGCAAAAGA TATCCGCGAG
ACATTTGCCC GCATGGCCAT GAACGATGAG GAGACGGTTG CGCTCATTGC CGGCGGCCAC
TCCTTTGGAA AGACCCACGG CGCCGGCCCG GCATCCCACG TGGGGCCCGA GCCTGAAGCC
GCCCCGATCG AGCAGCAGGG CCTTGGCTGG AAGAGCAGTT TTGGCACCGG TAAAGGCGGC
GATGCGATAG GGAGCGGCCT CGAGGTCACC TGGACTTCCA CGCCAACAAA ATGGAGTAAC
AACTTCTTCA GGATCCTGTT CAGCTACGAA TGGGAACTCA CGAAAAGCCC GGCCGGTGCA
TACCAGTGGC AGCCAAAAGA CGGTGCCGGA GCCGGCACGA TCCCGGATGC CCACGACAAA
AACAAGCGTC GCGCCCCGAC CATGCTCACC ACGGATCTTT CCCTCCGGTT CGATCCCGTG
TACGAGAAGA TCTCACGGCA CTTTTACGAA AACCCGGACC AGCTTGCCGA TGCATTTGCC
CGGGCCTGGT TCAAGCTGAC GCACCGCGAC ATGGGTCCGC GCACCCGGTA TCTCGGCCCC
GAGGTCCCAA AAGAAGCGCT CATCTGGCAG GACCCCATCC CGGCGGTCAA TCACACGCTG
ATCGGACCAA GGGAGATCAC CTTCCTCAAG AGAAAGATCC TTGCATCGGG GCTTTCCATC
CCGGAGCTTG TCCTGACTGC ATGGGCATCG GCCTCCACCT TCCGCGGTTC GGACAAGCGT
GGCGGTGCAA ACGGCGCCCG CATCAGGCTC GCGCCGCAGA AAGACTGGGA GGTAAACGAG
CCGGCCCGGC TTCGTAAAGT GCTTGCGGTT CTCGAAGGTA TCCAGCAGGA GTTCAACAAG
ACCGCCACCG GAGGAAAGAA GGTCTCGCTT GCTGACCTCA TTGTCCTTGC CGGGTGTGCG
GGTGTCTGGA AGGCAGCAAA GAACGGCGGC CATAAGGTAA CTGTCCCCTT CACGCCGGGG
CGCATGGACG CCACGCAGGA GCAGACCGAT GTGAACTCCT TTGCCGTGCT CGAGCCAAAG
GCCGACGGTT TCCGCAACTA CCTCAAAGGC CCGTATGCGG TATCGGCCGA AGAACTGCTC
GTGGACAAGG CGCAGCTGCT CACCCTTTCC GCACCGGAGA TGACGGTGCT TATCGGGGGC
CTGCGGGTCA TTGGCGCCAC CTACGGGCAG GCAACGCACG GAGTCTTTAC CACCCTTCCC
GGGGCGCTCA CCAATGACTT CTTTACTCAT CTCCTTGACA TGGGCACGGA ATGGAAGCCG
GTAGCGGGCA ACCCTGACGT GTTCGAGGGC AGCGACCGGA AAACGGGGGA GCCGAAATGG
ACCGGCACGC GTGTCGATCT CATTTTCGGT GCGAACGCCC AGCTCCGGGC CATTGCCGAG
GTGTACGCAA GCGCTGACGG TGAGGAAAAA TTTGCACAGG ACTTTGTGGC GGCATGGGCC
AAAGTGATGA ACCTTGACCG CTTCGATCTC GCCCAAAAGT GA
|
|---|
| Protein sequence | MTDDSTCPVT GGADKQVTGR GQSYRDWWPN QPNLRVLSQH SPRSNPMGGE FNYAEEFKKL
DFAAVKADLR ALMTSSQEWW PADFGHYGPL FIRMAWHSAG TYRTLDGRGG AGSGQQRFPP
LNSWPDNVNL DKARRLLWPI KKKYGRKISW ADLMILAGNV ALESMGFETF GFAGGRVDTW
EPDEDVYWGS ENTWLGDKRY SGDRKLENPL AAVQMGLIYV NPEGPNGKPD PVAAAKDIRE
TFARMAMNDE ETVALIAGGH SFGKTHGAGP ASHVGPEPEA APIEQQGLGW KSSFGTGKGG
DAIGSGLEVT WTSTPTKWSN NFFRILFSYE WELTKSPAGA YQWQPKDGAG AGTIPDAHDK
NKRRAPTMLT TDLSLRFDPV YEKISRHFYE NPDQLADAFA RAWFKLTHRD MGPRTRYLGP
EVPKEALIWQ DPIPAVNHTL IGPREITFLK RKILASGLSI PELVLTAWAS ASTFRGSDKR
GGANGARIRL APQKDWEVNE PARLRKVLAV LEGIQQEFNK TATGGKKVSL ADLIVLAGCA
GVWKAAKNGG HKVTVPFTPG RMDATQEQTD VNSFAVLEPK ADGFRNYLKG PYAVSAEELL
VDKAQLLTLS APEMTVLIGG LRVIGATYGQ ATHGVFTTLP GALTNDFFTH LLDMGTEWKP
VAGNPDVFEG SDRKTGEPKW TGTRVDLIFG ANAQLRAIAE VYASADGEEK FAQDFVAAWA
KVMNLDRFDL AQK
|
|---|
| |