Gene Mbar_A2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2893 
Symbol 
ID3627788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3707995 
End bp3709188 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content44% 
IMG OID637701741 
ProductO-linked N-acetylglucosamine transferase 
Protein accessionYP_306371 
Protein GI73670356 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.272299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG ACGAACCAAA AGATGAAACC TTCAGAAAAG AAGGCGGTGA AGAAAAATCT 
GAAGAAGAGC CGGTTTCCGA AGAAATGTTT GTTCTAAGCG ATTCGGGGGA TACAGGTAAG
CAAGAAGAAG TCAGTGATAA AGTCGTTGCA GCCAAGCTTA ATGAATACGG ACTTGATTTT
CTCAGCTGTG GCAACTTTAA TGAAGCAATG AAAGCTTTTG ATAAAGCAAT CGAGATTGAT
CCAGATAATA TAGACCTATT AAACAATAAA GCTCAAGCCC TTGAAACCGT TGGAAAATAC
GACGAGGCTC TTGGGTTTTA TGAAAAAGCT ATCAAAATCA ATGCTGAGGA CCCAGATATC
TGGAATAATA TGGCTTTCTC CTTGTCCCAG GTTGGTAAGT ATGACGAAGC TGTTAAGGCC
TATGAAAAAG CCCTTGAGCT CAGACCGGAC TATCCCAATG CATGGTATGG AAAGGCCCTG
AACCTGAGCC AGGCAGGAGA CTATAAGGCA GCTATCGAAG CCTATGAAAA AGTCCTTGAG
GAAAATTCCG ATTATAAAGA AGCCTGGGTA GGAAAAGGCA TAGCTCTGGG TCAAATGGGC
AAGTATGACG AAGCAATTAT CGCGTACGAT AAGGCAATTG AACTTGATCC CAACTTTGCC
GAAGCCTGGC ATTATAAAGG CGTGGACATG GACAGTCTTG GAAGTTACAG GCAGGCCTTA
AAAGCATATC AAAAAACTGT GGAGCTGGAT CCTGAGAACG ATGATGCCTG GAACAATATG
GGGATAGATC TCGAAAACCT TGAAAAATAT GACGAGGCAA TTAAAGCCTT TGACAAAGCA
ATCGAAATCA ACTCCGAAAA TGCCGATGTC TGGTACAATA AAGGTTTTAC CCTCAGCCAA
ATGCAAAGAT TCGAGGAAGC CGCAGAGACT TACAGGAAAG CTACACAGCT TGACCCTGAG
TATTTAGAAG CTTATTCCAG CCTGGGTTTC GTGCTTGCTC AGCTCAGACG CTTTGCAGAA
TCTCTGGAAA TTTACGAGCA GGCACTCAAG CTTAATCCCG AAGCTGCAGA CTCATGGTTC
GGGAAAGCTG TCTGTCTGAG TTTCCTCGGA AGGGAAGAAG AAGCAGAAGA AGCATACAGA
AAAGCTGTAG AAATTGATCC CAGATATGCC GAAGTAGGGG GAGATACCCA GTAA
 
Protein sequence
MSSDEPKDET FRKEGGEEKS EEEPVSEEMF VLSDSGDTGK QEEVSDKVVA AKLNEYGLDF 
LSCGNFNEAM KAFDKAIEID PDNIDLLNNK AQALETVGKY DEALGFYEKA IKINAEDPDI
WNNMAFSLSQ VGKYDEAVKA YEKALELRPD YPNAWYGKAL NLSQAGDYKA AIEAYEKVLE
ENSDYKEAWV GKGIALGQMG KYDEAIIAYD KAIELDPNFA EAWHYKGVDM DSLGSYRQAL
KAYQKTVELD PENDDAWNNM GIDLENLEKY DEAIKAFDKA IEINSENADV WYNKGFTLSQ
MQRFEEAAET YRKATQLDPE YLEAYSSLGF VLAQLRRFAE SLEIYEQALK LNPEAADSWF
GKAVCLSFLG REEEAEEAYR KAVEIDPRYA EVGGDTQ