Gene Mbar_A2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2424 
Symbol 
ID3625465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3061985 
End bp3063199 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content43% 
IMG OID637701292 
Productcysteine desulphurase 
Protein accessionYP_305924 
Protein GI73669909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0940549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATTC ACAATTGTGA AGGTGCAAGT GTGACCATTG AAGACAAGAC CATTTACATG 
GACAACTCTG CTACAACGCC TATAAGAAAA GAAGTTGTCG AAGAGATGCT TCCCTACATG
ACCGAGAATT TCGGAAACCC TTCTTCTATC TATGAAATCG GGAAAATCTC AAAACATGCA
ATAGACAAAG CAAGAGTAAA GGTTGCCAAT GCTCTCGGGG CTGAAGAAAA CGAGATCTAT
TTTACATCCG GAGGCACGGA ATCCGATAAC TGGGCAATTA AGGGAATTGC CTTTGCAAAC
CGGAATAAAG GAAAACACAT AATCACCTCT TCTATAGAAC ACCACGCAGT CCTTCATACC
TGTGCCTGGC TGGAAGGGCA GGGCTTTGAG GTAACATACC TGCCTGTTGA CAAATACGGA
ATGGTTTCTC CTGAGGAAGT GAAGAAAGCG ATTCGAGATG ACACCATCCT TATTTCCATA
ATGCTTGCAA ACAACGAAAT AGGAACAATC CAGCCTGTAG AAGAAATCGG AAAAATCACT
AAAGAGAACC GGATATATTT CCATACGGAC GCAGTGCAGG CAATAGGCCA TATTCCTATC
GATGTCAAAA AAATGAATAT TGACCTTCTT TCCCTTTCAG GGCATAAATT CGAAGGCCCA
AAGGGCTGTG GAGCCCTCTA CATCCGAAAA GGGACAAAAA TAGATACCCT TCTGCACGGT
GGAGCTCAGG AAAGAAAGCG AAGGGCTGGA ACCGAAAATG TCCCTGCTAT TGTGGGCCTT
GGAAAAGCTA TAGAGCTTGC AACAGCCAAA ATCGAAGAAT CAAATAAAAA CCTGCTCGAG
CTGAGAGAAC ACTTTATTAG AGGTCTTCTG AAAATCCCGA AAACTCACCT CAATGGGCAT
CCTACACAGA GGCTCGCAAA TAATGTAAAT GTCACATTTG AATACATAGA GGGCGAATCT
CTTTTGTTGC TATTGAATGC GAATGGAATT TTTGCATCTA CCGGAAGCGC ATGTAACTCT
TCTTCTCTTG AACCCTCACA TGTGCTTACA GCCTGTGGAG TCCCTCACGA AATTGTTCAC
GGTTCACTCA GACTTAGTCT TGGAAGGACG AATTCCAAAA AAGACGTGGA CAGAGTACTT
GAGGTTCTGC CTGAGATCGT GCAGAAGCTA AGAAACATGT CTCCACTTAC CCCAAAAGAG
TACAGGACTA TTTAA
 
Protein sequence
MYIHNCEGAS VTIEDKTIYM DNSATTPIRK EVVEEMLPYM TENFGNPSSI YEIGKISKHA 
IDKARVKVAN ALGAEENEIY FTSGGTESDN WAIKGIAFAN RNKGKHIITS SIEHHAVLHT
CAWLEGQGFE VTYLPVDKYG MVSPEEVKKA IRDDTILISI MLANNEIGTI QPVEEIGKIT
KENRIYFHTD AVQAIGHIPI DVKKMNIDLL SLSGHKFEGP KGCGALYIRK GTKIDTLLHG
GAQERKRRAG TENVPAIVGL GKAIELATAK IEESNKNLLE LREHFIRGLL KIPKTHLNGH
PTQRLANNVN VTFEYIEGES LLLLLNANGI FASTGSACNS SSLEPSHVLT ACGVPHEIVH
GSLRLSLGRT NSKKDVDRVL EVLPEIVQKL RNMSPLTPKE YRTI