| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2020 |
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| Symbol | |
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| ID | 3627837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2552095 |
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| End bp | 2553288 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700898 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_305534 |
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| Protein GI | 73669519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.611525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG TTGTCCTTGT AGCAGGCAAA GGCACAAGGA TGGAACCTCT AACTTCCGGC
TGTCCTAAAG TTATGCTCCA GGTTGCAAAT AAACCCATCC TCGAACATAT ACTTAATTCA
GCCATCGAAG CAGGCATCGA AGGCTTTGTC TTCATTACCG GTTATCTCGA AAAGCAGATA
AAAGAGTACT TCGGGGACGG AAACAAATGG GGAGTAAGCA TAGAGTATGT ACAGCAAAAG
GAGCAGCTAG GGACTGCAAA TGCGATAGGC TGTGCAAAAG GCTATGTTGA TGGGACTTTC
CTTGTACTTA ACGGGGATAT GCTCATAGAG CAGGAGGACT TAAAAGCCCT GGTCTCAAGG
ACAGAAGAAG CTGTCATCTG TGTAAAAGAG GTGGAAAACC CGGCGGATTT CGGAGTGCTT
GAAACCGAGA ATAATAGAGT TGTCAGGATA ATAGAAAAAC CTAAAAATCC CCCTACTAAC
CTTGCAAATG CCGGGATATA TCTTTTCAGG GAATCTATTT TTGACTTTAT TGACAGAACC
AAGGCCTCAG TGAGAAATGA GTTCGAGATT ACGGACTCCA TCCAGATGCT GATTGATAGT
GGAACAGCCG TGGGTTACAG CCCTCTCGAA GGTAGATGGA TAGATATAGG GTATCCCTGG
GACCTCTTGA AAGCAAACGA ATACCTTCTG AAAGGCCTTA AGAGCAGCTG TGAAGGTACT
GTAGAGCCGA ATGCTACCAT AAAAGGAGAG GTTGTAATCG GAAAAGGCAC TATTATCAGG
AACGGTTCTT ATATCGAAGG CCCAGTAGTG ATAGGAGAGA ATTGCGATAT CGGGCCTAAT
TGTTTTATCC GCCCTTCCAC TGCAATCGGG AACCATATTA GGGTAGGAAA TGCTGTGGAG
ATAAAAAATA CGATTGTCAT GGAAGATACT CATGTGGGAC ATCTGAGTTA TGTTGGGGAC
AGCATTATTG GGCACCACTG CAACTTTGGA GCGGGTACGA AAGTTGCAAA CCTCCGCCAT
GATGGGAAAA ACATAAAAGT AATGATAAAA AGCAGGATTC TTGACACGGG CAGGAGAAAA
CTCGGAGTGA TTATGGGAGA TGACGTGCAT ACCGGTATCA ACACAAGCAT AAATATCGGT
ACGATAATGG AAAAAGGAAG ATATACATAT CCTGGAGAGA TTGTCAAACA TTAA
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| Protein sequence | MKAVVLVAGK GTRMEPLTSG CPKVMLQVAN KPILEHILNS AIEAGIEGFV FITGYLEKQI
KEYFGDGNKW GVSIEYVQQK EQLGTANAIG CAKGYVDGTF LVLNGDMLIE QEDLKALVSR
TEEAVICVKE VENPADFGVL ETENNRVVRI IEKPKNPPTN LANAGIYLFR ESIFDFIDRT
KASVRNEFEI TDSIQMLIDS GTAVGYSPLE GRWIDIGYPW DLLKANEYLL KGLKSSCEGT
VEPNATIKGE VVIGKGTIIR NGSYIEGPVV IGENCDIGPN CFIRPSTAIG NHIRVGNAVE
IKNTIVMEDT HVGHLSYVGD SIIGHHCNFG AGTKVANLRH DGKNIKVMIK SRILDTGRRK
LGVIMGDDVH TGINTSINIG TIMEKGRYTY PGEIVKH
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