Gene Mbar_A1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1285 
Symbol 
ID3627772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1592080 
End bp1592868 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID637700175 
Producthypothetical protein 
Protein accessionYP_304828 
Protein GI73668813 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0843441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTT CAGAAATCCA GACCAAAAAT TCAGAAGTCC AGGTTAAAGA GATGGTAGCC 
CATAAATGGG ACCTTGCATC CGAAACTTTT GATACTCATG CAGGACACGG GATCCAGACT
CAAAAAGAAA GAGACGCCTG GAAGCGGGCT TTCTTGAAAG TTTTCCCGGG AAAAAGTTTG
AAAATTCTCG ACGTTGGCTG CGGGACAGGA GAATTAAGCT TACTGTTTGC TGAGATGGGG
CATGAGGTTG CAGGAATCGA CATTTCCGGA CAAATGCTGA AAATAGCAAA AGCAAAGGCT
GAAGCCCTCG GAGCGGACAT AACCTTTAGG GAAGGAGACG CAGAAAACCC TCCTTTTGAT
ACATCTTCTT ATGACATTGT GTTTAGCCGT CATCTTCTCT GGACGCTCCC TAATCCGAAA
GTAGCCGTAG AGAACTGGAA CAGAATTCTG CGGAAAAATG GGAAAGTCGT GATTGTTGAT
GGAGTCTGGG ACAGCGGCAC CCTGGGATCC AGGGCTCGCA AAAATGCCGG TGCTCTTTTG
ACCCTGCTTC TTGAAAGAAA AGATCCCCGA AAAGGACACT CTGACTATTC TGATGAACTC
AAAGCCCAGC TCCCGCATTT TGGAGGAGCT CCGCTTGAAA AAGTAAATGA GTACCTTTCA
AATTCAGGCT TTGGAAATAT CCAGATTTTT GACCTGAAAG AAGTAAGAGA TGCTCAGAAA
GAGAAGATGC CGTTAGGTGA ACGGGTTGTA CGCAGTTATC AGTACTACCT CATCTGCGGC
CGAAAATGA
 
Protein sequence
MSSSEIQTKN SEVQVKEMVA HKWDLASETF DTHAGHGIQT QKERDAWKRA FLKVFPGKSL 
KILDVGCGTG ELSLLFAEMG HEVAGIDISG QMLKIAKAKA EALGADITFR EGDAENPPFD
TSSYDIVFSR HLLWTLPNPK VAVENWNRIL RKNGKVVIVD GVWDSGTLGS RARKNAGALL
TLLLERKDPR KGHSDYSDEL KAQLPHFGGA PLEKVNEYLS NSGFGNIQIF DLKEVRDAQK
EKMPLGERVV RSYQYYLICG RK