| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0404 |
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| Symbol | |
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| ID | 3627040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 479284 |
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| End bp | 482832 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637699298 |
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| Product | hypothetical protein |
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| Protein accession | YP_303967 |
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| Protein GI | 73667952 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.465468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGA ATCCTGTGCT CGGTGTGGCA AAGGATGGTG TTATTCTTTA CTCTAATAAG
GCAGGGGAAT CCTTATTGTA TGAATGGGGT GTGAGAGTCG GAGAAAAATT ACCTCCGAAT
CTCGAAATTT TTGTCCAAAG GGCAATTTCC CGGAAAGGTA TTGAAAAAAT AGAAGTCACT
ATGGGTAAAA AAGTATACTT TATCGTTTTT GATCCCTCGC CTGAACAAGA ATGTGTAAAC
ATTTACGGAT TTGACATAAG TAGCCGTAAA AAGCTTGAGG GACAACTTCA GGGAAGTGAA
ACTCAAGAAA AGGCAAACCT GGAGCTTGCC AGGATTATTG ATGCTAAAGC GGTCCAGTCC
CTTATGAGTG ACTTCTATAC GCTTGCTCAT GTCCCTATGG GCCTAACCGA TTTGGAAGGC
AATGTTCTGG TGAGTGTTGG ATGGCAGGAT ATCTGCATGA AATTCCATAG GGTTAGTACT
GAAGCTTGCA AGAATTGTGT AGAAAGTGAC ATAAATCTAA CTGCTGGAGT TGCTCCGAGA
GGATATAAGC TGTACAAATG TAAAAACAAT ATGTGGGAAG TAGTAACTCC AGTTATGGTA
GAAGGTCAAC ACGTTGGCAA TATCTTCTCT GGACAGTTCT TTTTTGATGA CGAGCCTCTG
AACTATGAAC TTTTTCGGTC TCAAGCTAGG AAATATGGCT TCAATGAGGA AGAATATATA
AAGGCTCTTG AAACAGTTCC TCGGCTTAGT AAGAAAGCTG TGGACGCAGG CATGGCTTTC
TTCATGGCCT TTGCTAACAT GATATCACAA CTAAGCTATA GCAATATCAA GTTATCTCAG
TCACTGGCCG AACGTAATTC GGTTGTAGAC GCGTTGCGAA AGAGCGAAAA GCGTGAACGA
GCTCGTTCGG ATGAACTTGC AGTAGTATTG GATGCCGTGC CTGTAGCCGT GTATATAGCA
CGTGATCCCA AGGTGCTTCA GATAACTGGT AATCGTCTAT CCTATGAATG GCTCCGGACT
CAGGTGGGTA TAAACTTATC CAAGTCAGCT CCAGAGGGAG AGAAGCCAGA GATGTTTAAA
TTATTCAAGG ATGGGTTAGA GATCCCGCCT TCAAAAATGC CGTCACAGTT AGCGGCTACG
GGCATAGAAA TAGACGACTG CGAGCTAGAT ATCGTATCTG CTGACGGCCA GATACGACAT
GTACTGGGTA ATGCCAGACC TCTACATGAC GAGCAAGGAA ATCTACGTGG ATCAGTTTCT
GCGTTTATAG ACATCACAGC GCGAAAAAGA GCAGAAGATG CTATCAGGTT ATCAAACGTT
TATAATCGAA GCCTAATTGA AGCAAGTCTG GACCCTCTGG TAACTATTGG GCGTGACGGT
AAGATTACCG ATGTAAACAA TGCTACAGAA CAGATTACTG GATATTCTAG AAATGAGTTG
ATTGGAACTG ATTTTTCAGA TTACTTTACC GAACCTGAAA AAGCACGTGC AGGCTATCAG
CAGGTATTCA TGCAGGGTGA GGTTCGGGAT TATACCCTGG AAATCCAACA TAAGGACGGA
CATATAACTC CTGTTTTGTA TAATGCTTCA GTTTATAAAG ATGAGAATGG CAAGGTTATG
GGTGTCTTTG CTGCTGCACG TGATATCACA GAGCGAAAGA GAGCTGAGGA GGCACTTCTG
GAAAGTGAAT CACGTTTGAG GCTGGCCCAG GTTTCTGCAG GCGCAGGCAT ATGGGATTGG
AATATGTCTG CCGGCAAGAT TGAGTGGTCT GAAGACCTAT TCCGCCTCTT TGGTTTAGAT
CCCAGGAAAT CTGATGCTAG CTTTGACTTA TGGAGAAGTC TGGTCTATCC TGACGACAGG
CTGGTTGCGG AAAGACGGAT TGAAACAGCA ATCGACAACC ATACCTCCCT CGCGAGCGAA
TACCGGATCG TGCTTCCATC GGGAGAAGTA CGGTGGATCA ATGCCCTCGG CAATACGACC
TACTACAGCA ATGGGAAGCC TCAGCGTATG TCCGGTATTT GCATTGACAT TACCGAGCGC
AAATGGGTTG AAGAGGCGCT GCGGGAAAGT GAAGAGCGCT TCCGTGCTCT GGTGACTGCC
AGTTCAGAAA TGGTATATCG TGTGAACCCT GATTGGACTG AGATGCGCTA TTTCTATGGT
CGAGGTTTTC TTGCCAATAC AGAAAGCCCA AGCAACACAT GGATTCATGA ATACGTTCCT
CCGGAAGATC AGCCGCATGT GATGGCAGTC ATCAATGAAG CTATCCGGAC GAAGAGTACT
TACGAACTGG AACATAGGGT CCGTCTAGCA GACGGCAATT TAGGATGGAT TTTCTCGCGT
GCGGTTCCGA TGCTGGATGC AAATGGCGAA ATCGTTGAAT GGTTTGGAGC TGCCAGTGAC
ATCACAGAAC GCAAAGAAGC AGAATTTAAG TTAAAAAAAG CACATGAAAA TTTAGAAAAA
ATGGTTGAAG AGCGTACCGC AGAACTTGAA AAAGCTTACA ACTCGCTGAA AGAAAGTGAA
AAAGGTCTTG CAGAAGCTCA AAAAATGTCT CATATTGGAA ATTGGGAGTG GGATATGGTA
ACGGACAAAG CATACTGGTC CGAGGAAATG TATCGTATTT TCAGACGTGA TTCTCAAGAA
TCAGCACCAC CTTACAACGA GTTTTTAAAT TACATACATC CAGATGATCG AGACTATGTG
GATAGTGCCC TTGCCATTAA GAACGCGGTA AAAGGGCAAA CTTACAGTAT TGAATATAGG
GTTGTCCTGG ATAATGGGAA AGAGCGCATA GTTCACATGC AATCTGAAGT TATTTTTGAT
GAAAAAAACA ACCCTCTTAG AGCTAAAGGA ATTATTCAGG ATATTACAGA ACGTAAAGAA
GCAGAAGAAG CCTTAGCAAA TGTTGAGATT GCCCGTAAAA AGGAAATTCA CCATCGGATT
AAGAATAATC TGCAGGTAAT ATCTTCACTT CTTGACCTTC AGGCTGATAA GTTCAATAAT
CCGAGAGTTA TTGAGGCTTT CAGGGAAAGC CAGAACCGGG TTATATCTAT GGCTCTCATC
CACGAAGAAC TTTATAAAGG AGAAGGAACT GATACGCTGG ACTTTTCGAC ATACATCAGA
GAGCTAGCTG AAAATCTTTT CCAGACTTAC AGCCTTAAAA GCAAAAATAT CCACCTTTCA
ATGGATCTGG AAGAAAATAT ATTTCTTAAT ATGGACACTG GTGTCCCATT AGGAATAATT
GTCAATGAGC TCATTTCCAA CTCTCTCAAA CATGCATTTC CCGACAAAGG CAGGGGAGAA
ATCCAAATTA AACTACATAG AGACAAAAAA GGCAAGTCTA AAAAGGAAGG CGATAAGGAT
ACCAGTTTTA TTCTGATTGT TTCAGACAAT GGTATAGGCA TTCCTGAAAA TCTCAATATT
AAAGATGTTG ATAGTCTTGG TATACAGCTG ATAACTGCTC TCGTAGATCA GTTAGATGGG
AAGTTTGAAT TGAGAAGGAA CAATGGCACA GAGTTTACTA TGAGATTTAA AGTGATAGAA
AAAATATAA
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| Protein sequence | MNSNPVLGVA KDGVILYSNK AGESLLYEWG VRVGEKLPPN LEIFVQRAIS RKGIEKIEVT
MGKKVYFIVF DPSPEQECVN IYGFDISSRK KLEGQLQGSE TQEKANLELA RIIDAKAVQS
LMSDFYTLAH VPMGLTDLEG NVLVSVGWQD ICMKFHRVST EACKNCVESD INLTAGVAPR
GYKLYKCKNN MWEVVTPVMV EGQHVGNIFS GQFFFDDEPL NYELFRSQAR KYGFNEEEYI
KALETVPRLS KKAVDAGMAF FMAFANMISQ LSYSNIKLSQ SLAERNSVVD ALRKSEKRER
ARSDELAVVL DAVPVAVYIA RDPKVLQITG NRLSYEWLRT QVGINLSKSA PEGEKPEMFK
LFKDGLEIPP SKMPSQLAAT GIEIDDCELD IVSADGQIRH VLGNARPLHD EQGNLRGSVS
AFIDITARKR AEDAIRLSNV YNRSLIEASL DPLVTIGRDG KITDVNNATE QITGYSRNEL
IGTDFSDYFT EPEKARAGYQ QVFMQGEVRD YTLEIQHKDG HITPVLYNAS VYKDENGKVM
GVFAAARDIT ERKRAEEALL ESESRLRLAQ VSAGAGIWDW NMSAGKIEWS EDLFRLFGLD
PRKSDASFDL WRSLVYPDDR LVAERRIETA IDNHTSLASE YRIVLPSGEV RWINALGNTT
YYSNGKPQRM SGICIDITER KWVEEALRES EERFRALVTA SSEMVYRVNP DWTEMRYFYG
RGFLANTESP SNTWIHEYVP PEDQPHVMAV INEAIRTKST YELEHRVRLA DGNLGWIFSR
AVPMLDANGE IVEWFGAASD ITERKEAEFK LKKAHENLEK MVEERTAELE KAYNSLKESE
KGLAEAQKMS HIGNWEWDMV TDKAYWSEEM YRIFRRDSQE SAPPYNEFLN YIHPDDRDYV
DSALAIKNAV KGQTYSIEYR VVLDNGKERI VHMQSEVIFD EKNNPLRAKG IIQDITERKE
AEEALANVEI ARKKEIHHRI KNNLQVISSL LDLQADKFNN PRVIEAFRES QNRVISMALI
HEELYKGEGT DTLDFSTYIR ELAENLFQTY SLKSKNIHLS MDLEENIFLN MDTGVPLGII
VNELISNSLK HAFPDKGRGE IQIKLHRDKK GKSKKEGDKD TSFILIVSDN GIGIPENLNI
KDVDSLGIQL ITALVDQLDG KFELRRNNGT EFTMRFKVIE KI
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