| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0145 |
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| Symbol | |
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| ID | 3625833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 162863 |
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| End bp | 164602 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637699034 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_303710 |
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| Protein GI | 73667695 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.432053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAT TAGCAAAATT TAAGGCATTG GGGCTTTCAG ACAGTATGTT AAAAGCCCTT
AAAAAGAAAG GGTTTGAAGA ACCAACCCCA ATTCAGGAAA AAGTCATCCC GCTTTTTTTG
AAAGGAGAAT GTGATATTAT AGGGCAGGCT CAGACCGGAA CCGGGAAAAC AACGGCTTTC
GGAGCCCCCA TTATAGAAAA AATTCCGGAA AAATCAGGAA AGGTGCAGGC TATAGTCCTG
ACCCCGACTC GAGAATTAGC AATCCAGGTC TCAGAAGAAC TTAACTCTCT GAAAGGAGAC
AAAAAGCTGC ATATTGTCCC GATTTATGGG GGACAGTCCA TGACCCAGCA GTTCAGAATG
CTGAAAAGCG GAGTTGATAT TGTCGTGGGA ACTCCAGGAA GGGTCATCGA TCACCTTGAG
CGGAAGAGCT TGAATCTTGA GAACATTGCT TATTTCGTAC TGGATGAAGC TGATGAAATG
CTCAATATGG GCTTTATTGA TGATATTAAG GAAATCTTAA AGGCAACTGG GCCTGATAAG
AGAATGCTTT TCTTTTCAGC TACAATGCCA AAGCCTATCC TTGGCATCAT CAAGAAACAC
ATGAAGAACT ATGAATATGT TGCTATTAAG AAAGAAGATC TTGATGTGAA CCTTACTGAG
CAGATTTATT TCGAAGTCAA GGAAAGCGAC AAATTTGAAG CCCTGTGCAG GATTATCGAT
ATTGAAGACG AATTCTACGG GCTTGTGTTC TGCAGAACAA AAACCGATAC CTCCCAACTT
GCCCAGAAGC TTGGAGACCG GGGATATGCA GCCGATGCTC TGCACGGTGA TCTTTCCCAG
CGTGAAAGGG AAAAGATACT GAACAGGTTC AGAAAACAAA AGATTAACAT CCTCGTAGCA
ACCGATGTTG CAGCTCGAGG TATCGATATC ATGGACCTGA CCCACGTAAT TAACTATTCT
CTTCCGCAAG ACCCCGAGTC TTACGTACAC AGGATAGGAA GAACCGGTAG GGCAGGAAAG
CAGGGAACTG CAATTACTTT CGTTACATCT ACGGAATACA GGCGGCTCAC ATACATAAAA
AAGACTTCAA AATCCGCAAT GAAGAGGGGC CGAATTCCTG AGATAAAAGA TGTAATTAAA
GCTAAAAGGG CAAGAGTAAA AGCCGAACTC GAAGAAACTA TAAAAAACGA GGAGTACGGA
GACTGTCTTG AGATGAGTGA AAAGTTCCTT GAAGAATACC CGGCCGAGAA AATCCTGGCT
GCTCTCCTGA AGTACTCTTT CAAAGAGATG TTCGACGAAA GCATGTACAC AGAGATCTCC
GGAAGTTCAT ATGTCGACCG GAAAGGCAAA ACCAGGCTTT TCATCGCAAT GGGAAAAGCT
GACGGCATGA CCCCTGAGAA GCTCTGCGAG TTTATACAGG AAGAAACCGG AGTAAGCGAC
CTTAAAATAA GGGATGCAGA AATTTTCCCG CACTTCTCCT TCGTAACTGT ACCTTTTGCC
CAGGCTTCAG CCCTGCTTGA AATCTTCAAA GACAAAAAGA GAGGTCGAAA ACCCTTTATA
GAGCTTGCCC AGAAATCAAA GAGAAGAAGC TCAAAGAGTG CGGATGAATA TCGTGGTGGC
ACTCGTAATG GCTCCAGGAG TTATTCTAGA AATGACTCCT GGAATGGCTC TCGCAATACG
AACAGCAAAA GTTATACAAG AGATACACGA ACTGCGAAGA AAAAATATTC TTCGTACTAA
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| Protein sequence | MEKLAKFKAL GLSDSMLKAL KKKGFEEPTP IQEKVIPLFL KGECDIIGQA QTGTGKTTAF
GAPIIEKIPE KSGKVQAIVL TPTRELAIQV SEELNSLKGD KKLHIVPIYG GQSMTQQFRM
LKSGVDIVVG TPGRVIDHLE RKSLNLENIA YFVLDEADEM LNMGFIDDIK EILKATGPDK
RMLFFSATMP KPILGIIKKH MKNYEYVAIK KEDLDVNLTE QIYFEVKESD KFEALCRIID
IEDEFYGLVF CRTKTDTSQL AQKLGDRGYA ADALHGDLSQ REREKILNRF RKQKINILVA
TDVAARGIDI MDLTHVINYS LPQDPESYVH RIGRTGRAGK QGTAITFVTS TEYRRLTYIK
KTSKSAMKRG RIPEIKDVIK AKRARVKAEL EETIKNEEYG DCLEMSEKFL EEYPAEKILA
ALLKYSFKEM FDESMYTEIS GSSYVDRKGK TRLFIAMGKA DGMTPEKLCE FIQEETGVSD
LKIRDAEIFP HFSFVTVPFA QASALLEIFK DKKRGRKPFI ELAQKSKRRS SKSADEYRGG
TRNGSRSYSR NDSWNGSRNT NSKSYTRDTR TAKKKYSSY
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