Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1339 |
Symbol | |
ID | 4655921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 1515424 |
End bp | 1516578 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639811306 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_958614 |
Protein GI | 120554263 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.611384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCTG CTACCCGTGC CGGGCATCGC TGGCTGAAGT GGGTTGGATT TCTGTGTGTG CTGTGCGCGA TAGCCTTCGC TGTCGTTTGG TACGCCCGCA ATGCTAACGG CAATGAACCG GCTTTGAATA CCGTGGCGGT TAGCCGAGGC GACATCCAGA ACCTGGTTTC GGCCACCGGC GTGCTTGAGC CGAGTAATTA TGTGGATGTG GGTGCACAGG TTTCCGGCCA GCTGGAGCTG ATTCACGTAC GAGTGGGCCA ACCCGTTAGC ACCGGCGATC TGCTGGCGGA AATCGACCCT ACCGTGTATG TGGCGAAAGT GGATGCCACC CGCGCCCAGT TGAAGAACCA GCAGGCCCAG CTAGCCGATC GCAAGGCCCA GCTGCGCCTC GCCGAGATCC AGTTCCAGCG CCAGCAGAAC CTGTGGCGTG AAGATGCGAC CACACGGGAA TCCCTGCAGA CCTCCGAAGC ATCTTTAGCG TCCGCCCGGG CGCAGTTGGC CATGCTTGAG GCACAGATAG AACAGACCTC CTCCACCCTG AGGGCTGAAG AAGCCAATCT GGGTTATGCC CGCATCTATG CGCCGATGGA TGGCACTGTG GTATCCATCG AAGCCCGCCA GGGGCAAACT CTGAACGCGA GCCAGACCGC GCCGTTGCTT ATGCGCATTG CCAATCTGAG CACCATGCGG GTGCGGGCCC AGGTGTCTGA GGCCGACGTT GGCAAGCTGC AAGCGGGCAT GCGGGTGTAC TTCACCACAC TCGGCGATGC CGAGCATAAG CTCTACGGAG AGTTGCAGTA CATTGAGCCA ACTCCCGAAG TAACCAACAA CGTGGTGCTC TACAACGCCC TGTTTACGGT GGATAACCAG GAGGGACGGT TGCTGCCCCA GATGACCGCC CAGGTGTTCT TTATTCAGGA AGAAGCGCTG GACGTATTGC GGGTGCCAGT CAGTGCGGTG GCGAGAAACC AGGTCAAGGT CCTGGATGCG AAGGGGCAGC CACAGATTCG GGCCATCGAA ACCGGCATCA GCAACCGCGT ATACGTGGAG GTTCGGTCCG GATTGAATGA GGGTGATCAG GTGGTTCTTG CAAACCGGGA TCCGCGGGCC GGTCAGGGTG AGAGCCGGGC TGCCTTTCGG GGTATGCTGA GATGA
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Protein sequence | MASATRAGHR WLKWVGFLCV LCAIAFAVVW YARNANGNEP ALNTVAVSRG DIQNLVSATG VLEPSNYVDV GAQVSGQLEL IHVRVGQPVS TGDLLAEIDP TVYVAKVDAT RAQLKNQQAQ LADRKAQLRL AEIQFQRQQN LWREDATTRE SLQTSEASLA SARAQLAMLE AQIEQTSSTL RAEEANLGYA RIYAPMDGTV VSIEARQGQT LNASQTAPLL MRIANLSTMR VRAQVSEADV GKLQAGMRVY FTTLGDAEHK LYGELQYIEP TPEVTNNVVL YNALFTVDNQ EGRLLPQMTA QVFFIQEEAL DVLRVPVSAV ARNQVKVLDA KGQPQIRAIE TGISNRVYVE VRSGLNEGDQ VVLANRDPRA GQGESRAAFR GMLR
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