| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0548 |
|---|
| Symbol | |
|---|
| ID | 3828390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | - |
|---|
| Start bp | 655474 |
|---|
| End bp | 655941 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 19% |
|---|
| IMG OID | 637823703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_424519 |
|---|
| Protein GI | 83319737 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA AAATAATTTG TTTTGGTAAA TTAGATAAAG CATTTTATGT TGATGCTTTT
AATGATTATT TTAAAAGGTT AAAAAAATAT GTAGATTTGG AAATTATTGA ACTAAAAGAA
GAAATTAATG GTGAATTAAA TAAAATTAAA GATGAGAATT CTAACTTATT ATTAAAAAAA
TTAGAAAATT ATAAAGATTT TGAAAAAATA ATTCTTGATG TTAATTCAAA ATTAATTTCA
ACTGAAAATT TAGTAGAAAT TATAAAAACA AATCTTAACT ATAAAACAGC AAAAATCTTA
TTTGTTATAG GGCCTAGTGA TGGATATTCA AAAAGTTTTT TAAATTCTTT TACTAATAAG
TTTTCACTAG CTAAAATTAC ACTTCCACAT CAATTGTGTA GAATTGTTTT AATAGAACAA
ATTTATAGAG TTTTTAAAAT TATTAATAAT GAAAAATACC ACAAATAA
|
|---|
| Protein sequence | MKIKIICFGK LDKAFYVDAF NDYFKRLKKY VDLEIIELKE EINGELNKIK DENSNLLLKK
LENYKDFEKI ILDVNSKLIS TENLVEIIKT NLNYKTAKIL FVIGPSDGYS KSFLNSFTNK
FSLAKITLPH QLCRIVLIEQ IYRVFKIINN EKYHK
|
|---|
| |