| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2132 |
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| Symbol | |
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| ID | 3103474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2296643 |
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| End bp | 2297725 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637171282 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_114558 |
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| Protein GI | 53803788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.732379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAACA AAAGTTTCGG CGTTCTGGTC CTGGCCGCTT CGCTGGCTGC CATCGCCGGA
TGGTGGCGAC ATACCGCGAC GCCGCCGGCA GCGGTGCCGC CCGCCGATGT GCGGGTGCCG
CCGTCGGTCC CGGTGTTCGT GGCGCGGGTC TGGGCTGAGT CCGTCGACGA TGCCATCGAC
GCCGTCGGTA CCCTCTTGGC TGACGAGTCG GTCGTGATCC GCCCGGAGGT CCCGGGACGG
GTCAAAGCGA TCCGGTTCAC CGAGGGTAAA CCGGTCAGGG CGGGCGAGGT GCTGATCGAG
CTCGAGCAGG ACGAATACCG GGCGGCCTTG GCCCAGAGTC TGGCCCAGCA GGAGCTGGAC
CAGGCCAACT TCGCGCGCAT GAAGGCGATG CGTGAGCGCG CGCATGTCAG TGCCCAGCAG
TACGACGAGG CCGTGTCCAA GCTCAAGTAT TCGAATGCCT TGGTGGAACG GGACCGGGTG
CTGCTGCAGA AGACCGTGCT GCGCGCGCCG TTCGACGGCA TCGTCGGTAT CCGGCAGGTC
AGCGTCGGGG AATACGTAGA CAAGGGCAAG GCGCTGGTCA ACCTGGAGGC CCTGGACCCG
GTCAAGCTGG ATTTCAAGGT GCCGGAGAAG TATGCCGGCA CCGTGACGAG GGGGCTCGCC
CTGACTGCCG AGGTGGCGGC TTATCCCGGG CGGGTTTTTT CCGGCCAGGT CTACGCCGTG
GATCCGCGCC TCGAGGAGGA AAGCCGCGCC CTGAGGGTGA GGGCGCGCCT GCCGAACCCC
GATCGGGCAC TGCGTCCGGG TATGTTCGCG CGTATCCATC TGGCACTGGG CGCGGCGCGC
AGGGCACTGT TCGTGCCGGA GTCCGCCCTG GTGGTGAAGG GCAGCTCCGC GTCGGTGTTC
CGGGTGGTGG CCGGCAAGGC GGTCGCGACT CCGGTGGCGA TCGGCGCGCG CTACAAGGGC
AAGGTCGAAA TCGTGCAGGG GCTCGCCGAG GGTGACAGCG TCGTGACCGA AGGCCAGGTC
AAGCTTCGCG ACGGGGCCCC GGTCGCGGTT CCCGAAGCGA AGGAAAATCC GCCCGCCCCA
TGA
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| Protein sequence | MSNKSFGVLV LAASLAAIAG WWRHTATPPA AVPPADVRVP PSVPVFVARV WAESVDDAID
AVGTLLADES VVIRPEVPGR VKAIRFTEGK PVRAGEVLIE LEQDEYRAAL AQSLAQQELD
QANFARMKAM RERAHVSAQQ YDEAVSKLKY SNALVERDRV LLQKTVLRAP FDGIVGIRQV
SVGEYVDKGK ALVNLEALDP VKLDFKVPEK YAGTVTRGLA LTAEVAAYPG RVFSGQVYAV
DPRLEEESRA LRVRARLPNP DRALRPGMFA RIHLALGAAR RALFVPESAL VVKGSSASVF
RVVAGKAVAT PVAIGARYKG KVEIVQGLAE GDSVVTEGQV KLRDGAPVAV PEAKENPPAP
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