Gene MCA1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1413 
SymbolrpsA 
ID3104284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1498659 
End bp1500326 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content60% 
IMG OID637170588 
Product30S ribosomal protein S1 
Protein accessionYP_113870 
Protein GI53804257 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0578612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAAA GCTTTGCAGA ACTGTTTGAA GAAAGTCTGG CGAAAGCCGA GATGCGCGCG 
GGCAGCATCA TCACCGGCAC CGTCGTCGAC ATCGGCACCG ATGCGGTCGT CGTCAACGCC
GGACTGAAAT CCGAAGGCGT CATTCCGAAG TGGCAATTCC TCAATGCCGA CGGCCAGCTG
GAAGTCCAGG TGGGCGATCA GGTCGAGGTC GCTTTGGATA TGGTGGAGGA CGGCCTCGGC
GCGACCCTGC TGTCCCGCGA CAAGGCGAAA AAGCTCAAGG CATGGGAAGA CCTGGAGAAA
GCTTTCGAGA ACAACGAGAC CGTTGTCGGC CGTATCGTCG GCAAGGTCCG CGGTGGCTTT
ACCGTGGCCA TCGGCGCCCT ACGGGCGTTT CTGCCCGGCT CCCTGGTCGA CGTGCGTCCC
GTGCGCGACA CCGCTTTCCT GGAAGGAAGG GACCTGGAGT TCAAGGTCAT CAAGATCGAT
CAGAAGCGTA ACAACGTGGT GCTGTCGCGC CGTGCCGTGG TCGAATCCGA GTTCAGCGCC
GAGAAGGAAG CGCTGATGGA AAGCCTCAAG GAAGGCGCCA TCGTCACCGG CGTGGTCAAG
AATCTCACCG ATTATGGCGC ATTCATCGAC CTGGGCGGAA TCGACGGCCT GCTCCACATC
ACCGACATGG CCTGGAAGCG CGTGCGTCAC CCGTCCGAAG CCGTCCAGAT CGGCCAGGAG
CTGCAGGTCA AAGTGCTCAA GTACGATCAG GAAAAGAACC GCGTGTCACT GGGCCTAAAA
CAGCTCGGTG AAGACCCCTG GGTCAACATC GCCCGCCGCT ATCCCGCCGG CACCCGCTTG
TTCGGCAAGG TCAGCAACCT CACCGATTAC GGCTGCTTCG TCGAACTGGA AGAGGGCGTC
GAGGGTCTGG TCCACGTCTC GGAAATGGAC TGGACCAACA AGAACGTCAA TCCGGCCAAG
GTCGTCCAGC TCGGTGAGGA AGTCGAGGTC ATGGTCCTGG ACATCGACGA GGAACGCCGC
CGCATCTCCT TGGGCATGAA GCAGTGCAGA CAGAATCCCT GGGACGAGTT CGCTGCGACC
CACAAGAAGG GCGAGAAGAT CCGGGGCACG ATCAAATCGA TCACCGATTT CGGTATCTTC
ATCGGCCTCG ACGGCAACAT CGACGGCTTG GTGCATCTGT CCGACATTTC CTGGTCGGTG
CCCGGCGAGG AAGCCATCCG CCAGTTCAAG AAAGGCGACG AGCTGGAGAC CGTCATCCTG
GCGATCGATC CGGAACGCGA GCGCATCTCG CTGGGCATCA AACAGCTCGA ACAGGATCCG
TTTCAGAACT TCCTGGCGGC TCACGACAAA GGTTCGATCG TGCGCGGCGT GGTAAAAGAG
GTGGATGCCA AAGGCGCGGT CATCACTCTG GCGGACAACG TGGAAGGCTA TCTGCGCGCC
TCCGAAATCC AGCGCGACCG GGTCGAAGAC GCGCGGGCAC TGCTGAACGT GGGTGACGAA
ATCGAAGCCA AATTCATCGG TGTCGACAAG AAAACCAAGT CGATCTCCCT GTCGATCAAG
TCCAAGGATC AGGATGAGGA AGCGGCGGCG ATCAAGGACT ACTCGCAGCA GGTGTCCGGC
ACCCCGACCC TCGGCGACAT CTTCAAGGAA CAGATGGAAA ACCGCTGA
 
Protein sequence
MGESFAELFE ESLAKAEMRA GSIITGTVVD IGTDAVVVNA GLKSEGVIPK WQFLNADGQL 
EVQVGDQVEV ALDMVEDGLG ATLLSRDKAK KLKAWEDLEK AFENNETVVG RIVGKVRGGF
TVAIGALRAF LPGSLVDVRP VRDTAFLEGR DLEFKVIKID QKRNNVVLSR RAVVESEFSA
EKEALMESLK EGAIVTGVVK NLTDYGAFID LGGIDGLLHI TDMAWKRVRH PSEAVQIGQE
LQVKVLKYDQ EKNRVSLGLK QLGEDPWVNI ARRYPAGTRL FGKVSNLTDY GCFVELEEGV
EGLVHVSEMD WTNKNVNPAK VVQLGEEVEV MVLDIDEERR RISLGMKQCR QNPWDEFAAT
HKKGEKIRGT IKSITDFGIF IGLDGNIDGL VHLSDISWSV PGEEAIRQFK KGDELETVIL
AIDPERERIS LGIKQLEQDP FQNFLAAHDK GSIVRGVVKE VDAKGAVITL ADNVEGYLRA
SEIQRDRVED ARALLNVGDE IEAKFIGVDK KTKSISLSIK SKDQDEEAAA IKDYSQQVSG
TPTLGDIFKE QMENR