Gene MCA1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1051 
SymbolprfA 
ID3103419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand- 
Start bp1101203 
End bp1102285 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID637170235 
Productpeptide chain release factor 1 
Protein accessionYP_113526 
Protein GI53804790 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0598725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCCTT CCGTTCAACA GAAACTCGAG AACCTGTCCC ATCGCTTCGA AGAAATCACC 
GGCCTCCTGG CCACCCCGGA AGTCCAGAAC GATCAAAACC GGTTCAAGGC CCTGAGCCGG 
GAATACGCCC AGCTCGAACC CTGTGTCGCC TGTTTCCGGC GCTACCGGGA AACGCTGGAG 
GGCCTGGATC ATGCGCAAGC ATTGCTGCAG GATCCGGATC CCGAAGTCCG CAGCCTGGCG 
CGGGAAGAAC TCGAAACCGG GCGCAAGCGC TGCGATGCGC TGGAGCAGGA GCTGCAGATT 
CTGCTGCTGC CGCGCGACCC CAACGATGAG CGTAACGTGT TCCTCGAAGT CCGGGCCGGC 
ACCGGCGGCG CAGAAGCGGC GATCTTCGCC GGTGATCTGC AGCGCATGTA CAGCCGCTAC 
GCCGAACGGC AGGGCTGGCG AGCCGAGATC GTCAGCGAGA GCGAGGGTGA GCACGGCGGC 
TACAAGGAGG TCGTGATGCG CATCAGCGGC CAGAATGTCT ATTCCCGGCT CAAATTCGAA 
GCCGGTACCC ACCGCGTCCA GCGGGTGCCC ACCACCGAAG CCCAGGGCCG CATCCATACT 
TCGGCCTGTA CCGTGGCGAT TCTCCCGGAA TTCGACGATG TCGAGATCGA TATCAACCCG 
GCCGATCTGC GCATTGACAC CTTCCGCGCC TCGGGCGCTG GCGGTCAGCA CGTCAACCGG 
ACCGATTCGG CCATACGCAT CACCCACATT CCGACCGGCA CCGTGGTGGA GTGCCAGGAC 
GAGCGTTCCC AGCACAAGAA CCGGGCGCGT GCCATGTCGC TGCTGCAGGC CCGTATCCTG 
GCCGCCGCCC AGGAAAAGCA GAATTCCGAG ATCGCCGCAT CGAGGAAACT GCAGGTAGGC 
AGCGGCGACC GCTCCGAGCG CATCCGGACC TATAACTTCC CGCAGGGCCG GCTGACCGAC 
CATCGGATCA ATCTCACGAT CTACCGGCTG GACGCCATCA TGGAAGGCGA CCTCGACCCG 
GTCATCGATC CCCTGCTGCA GGAGCATCAG GCCGACATGC TGGCCAGCCT GGCCGGAAGC 
TGA
 
Protein sequence
MNPSVQQKLE NLSHRFEEIT GLLATPEVQN DQNRFKALSR EYAQLEPCVA CFRRYRETLE 
GLDHAQALLQ DPDPEVRSLA REELETGRKR CDALEQELQI LLLPRDPNDE RNVFLEVRAG 
TGGAEAAIFA GDLQRMYSRY AERQGWRAEI VSESEGEHGG YKEVVMRISG QNVYSRLKFE 
AGTHRVQRVP TTEAQGRIHT SACTVAILPE FDDVEIDINP ADLRIDTFRA SGAGGQHVNR 
TDSAIRITHI PTGTVVECQD ERSQHKNRAR AMSLLQARIL AAAQEKQNSE IAASRKLQVG 
SGDRSERIRT YNFPQGRLTD HRINLTIYRL DAIMEGDLDP VIDPLLQEHQ ADMLASLAGS