Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0990 |
Symbol | sufD |
ID | 3102947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1036035 |
End bp | 1037339 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637170177 |
Product | FeS assembly protein SufD |
Protein accession | YP_113468 |
Protein GI | 53804903 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCGC TATCTCACAG CCTTTACGTT GATTCATACC GCGAACCGGC CACCAATGAA CCTGCCTGGC TGAGCCGGGC CCGCCGGCAG GCGCTGGCGC GTTTCGAGGC GTCCGGCTTC CCCTCCCCGC GCGACGAGGA ATGGCGCTAC ACCCATGTCG CGCCGATCGA GCGCAAGCTG TTCACCGCTG CGACCGGTTC CGCCGACACC GACGCTGCCG AAGCGCTGAT CGAAAGCTGC CGGATCGCCG ACGCCTGGTC GCTGGTGTTC GTCGACGGCA TGTTCGTGCC CGGGCTGTCC GAGCGGCATG GCCTGCCTGC CGGCGTCACG CTGGAAAGCC TCGCCTCGCT GCTCGCCCTG AGCGAAGCCG ACGGGAATGC CGCCTGGCTG GAATCCGGAC TCGAACGAGA AACCGAATCC GATCGGCACG GCTTCCTCGA CTTCAACACC GCCTTCTTCA CCGACGGCGC CGTACTGCGC CTGGAAGAGG GCGTCGCGCT GGAAAAACCG GTCCAGCTGT TCTTCGTCTC GACTCGCAAC GACGGCCGCT CCACGCTGCG CAACCTGATC CGGATCGGCA GGAACGCCGA GGCGCGCGTC GTCGAAACCC ACGTCGGCCC GCCGGAGACC GGCTATCTGG GCGCCGTGGT CAACCAGATC GAAGTCGCGG ACAACGGCGG GCTGAACCAT TACAAGCTCC AGCTCGACGG CGGCAGGGCC TACCACTTCG GCGGCAGCTA CGCCCGCGTC GCCCGCGACG GCCGCTTCGG CCATCACCTG TTGTCGCTGG GCGGACTGCT GGTCCGCAAC GAGGTGCACG CCCGTCTTGG CCACGCCGCC CAGACCGAGA TGAACGGAGT GTTCCTGAGC GAAAACCGGC AGCATGTCGA CAACCACATC CGGGTGGACC ACGACGAACC GCATGGCAGC AGCCGCGTGA GCTATCGCGG CATCCTCGAG GACCGCTCGC GCGGCGTGTT CCAGGGGCGA ATCGTGGTGC ACGCGGATGC CCAGAAGACC GACGCGGAAA TGAACAACCG CAACCTGCTG CTGTCCGATG ACGCCGAGAT CGACACCAAG CCCCAGCTCG AGATCCATGC CGACGACGTG AAGTGCGCCC ATGGCGTCAC GATCGGCCAG CTCGATCCGG ATTCGGTGTT CTACCTGGAA TCGCGCGGCA TCGACGCGGC CACGGCGCGC GAGATGCTGA CCTTCGCTTT CGCGGCCGAA ATCGTCGAAC GGTTCGGCCC GCTCCGCGAG CGGCTGCGCG GCCTGCTGCT GGCCCGTTTC CCGAACGCAC AATGA
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Protein sequence | MSALSHSLYV DSYREPATNE PAWLSRARRQ ALARFEASGF PSPRDEEWRY THVAPIERKL FTAATGSADT DAAEALIESC RIADAWSLVF VDGMFVPGLS ERHGLPAGVT LESLASLLAL SEADGNAAWL ESGLERETES DRHGFLDFNT AFFTDGAVLR LEEGVALEKP VQLFFVSTRN DGRSTLRNLI RIGRNAEARV VETHVGPPET GYLGAVVNQI EVADNGGLNH YKLQLDGGRA YHFGGSYARV ARDGRFGHHL LSLGGLLVRN EVHARLGHAA QTEMNGVFLS ENRQHVDNHI RVDHDEPHGS SRVSYRGILE DRSRGVFQGR IVVHADAQKT DAEMNNRNLL LSDDAEIDTK PQLEIHADDV KCAHGVTIGQ LDPDSVFYLE SRGIDAATAR EMLTFAFAAE IVERFGPLRE RLRGLLLARF PNAQ
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