| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02389 |
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| Symbol | rnhA |
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| ID | 6777853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2579768 |
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| End bp | 2580238 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755828 |
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| Product | ribonuclease H |
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| Protein accession | YP_002126679 |
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| Protein GI | 196157190 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.197834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCAAA AGACCATTCA TATTTATACC GACGGCTCCT GTCTAGGCAA CCCAGGCCCT
GGTGGGTATG GTGCTGTATT AATTTATAAA CAGCATAAGA AAGAGCTAAG CGACGGATTT
GCGCATACCA CAAATAACCG CATGGAGTTG CTGGCCCCTA TCGAAGCGCT AAACAGCCTG
ACTGAGCCTT GTGCGGTAGA ACTCACTACC GACAGCCAGT ATGTAAAAAA TGGGATTAAC
CAATGGATCC ATAACTGGCG CAAAAACGGT TGGCGTACGT CTGATAAAAA GCCAGTGAAA
AATGCCGATT TATGGCAACG GTTAGATGAA GCAGTGAAAA AGCATCAAGT GAATTGGCAC
TGGGTAAAAG GCCACTCGGG GCACCCCGAA AATGAACGCT GCGATGAGCT TGCTCGCGGG
GCCGCCGAAG CGAAACCAAC TCAAATCGAT GAAGGTTTTG TTGGCAACTA A
|
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| Protein sequence | MAQKTIHIYT DGSCLGNPGP GGYGAVLIYK QHKKELSDGF AHTTNNRMEL LAPIEALNSL
TEPCAVELTT DSQYVKNGIN QWIHNWRKNG WRTSDKKPVK NADLWQRLDE AVKKHQVNWH
WVKGHSGHPE NERCDELARG AAEAKPTQID EGFVGN
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