| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00020 |
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| Symbol | |
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| ID | 6777008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 22730 |
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| End bp | 24049 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753445 |
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| Product | 16S rRNA m(5)C 967 methyltransferase |
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| Protein accession | YP_002124334 |
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| Protein GI | 196154845 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TACCCCTTCC CAAACAAAAG AACCTGCGTG CAGATTGCGC GTGGGTTATT
TACCAAATCT TAGAGCAAGG CAAATCATCA CGCGAATGTT TAGAGCGAGT TCAGCGTAGG
CACAATGCAC GCGATAACGC TTGGTTACAA GAAATGTCGT TAGGGGTAAT GCGTCGCCTT
CCTCTTTTAC AACATTGGCT AAGAGCCCTA TTAGATAGGC CCCTTAAAGG TAATAAGAAA
GTAATAGAGC ACCTTATCCT GCTTGGGTTA TATCAGCTGA ACTTTTCTCG GGTTAGCAAC
CACGCGGCCG TGGGAGAAAC CGTAGCAGCG GCGTCTTATT TAAACGCCGC TGGCCTTAAA
GGTTTAGTCA ATGCCGTTTT GCGTAATTTT CAGCGTGAGA ACCTTGCCGA TAAACCCGTC
GACGATGCTA TTATCAATAG CGGCTTACCG AAGTGGCTTT ATAAAGCGAT AGAGCAAGCC
TACGGTGCAG AGGCCGACAA TGTGCGTGCC GAAACTAACG CAATGGCACC GATTTGGCTT
CGAGTGAATA GGCAGCAGGT GAGTTTTAGC GCCTTTACCG AAGCACTTGA TAAGGCAGAA
GTAAAATACA CGCTAAGTGA AAGCCACCGC AATGCAATCG TCCTTTCTCA ACGCGAAGAT
ATTACGGGCT TACCCGGGTT TGAAAAGGGT CACTTTGCCG TACAAGACGG CGCGGCCCAA
TTAGCGGCAC ATTATTTACA ACCACAAGCT AATGAGCGCA TTTTAGATTG CTGTGCCGCT
CCGGGCGGAA AAACCGGTCA CATTGTAGAG TGTGCTCCTG ACACAGAGTA CGTGTTAGCA
CTCGATGCTG ATGCCACACG CCTTAAACGC GTAGAAGAAA ATATGACGCG ATTGCAGCAT
AAGGTAGACA TTAGGCAAGG TGATGCAGCT AACCCTGAAT CATGGTGGGA CGGAAAACCC
TTCGATAGAA TTTTGTTAGA CGCTCCCTGC TCTGCCACTG GTGTTATTCG TCGTCATCCA
GATATTCGCT GGCTGCGTAA AGCAAATGAC ATAGATAACT TAGCACAGCT ACAACGCCGC
ATCTTAGATA CATTGTGGGG CTTATTGAAA CCTGGCGGTA CGCTGCTTTA TGCCACCTGC
TCTATTTTAC CGAAAGAGAA TATGGCGCAA ATACAACAGT TCCTTGCTGA CACGCCAGAT
GCGTCGCTAT CTCCTATTTT AAAAACGGAA ACACCAGACA AGCCAGGCCG TCAAATTACA
CCAGGTGAGC AACAAATGGA TGGTTTCTAC TATGCGAGGC TGGTAAAGTC ACAAGACTGA
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| Protein sequence | MKPLPLPKQK NLRADCAWVI YQILEQGKSS RECLERVQRR HNARDNAWLQ EMSLGVMRRL
PLLQHWLRAL LDRPLKGNKK VIEHLILLGL YQLNFSRVSN HAAVGETVAA ASYLNAAGLK
GLVNAVLRNF QRENLADKPV DDAIINSGLP KWLYKAIEQA YGAEADNVRA ETNAMAPIWL
RVNRQQVSFS AFTEALDKAE VKYTLSESHR NAIVLSQRED ITGLPGFEKG HFAVQDGAAQ
LAAHYLQPQA NERILDCCAA PGGKTGHIVE CAPDTEYVLA LDADATRLKR VEENMTRLQH
KVDIRQGDAA NPESWWDGKP FDRILLDAPC SATGVIRRHP DIRWLRKAND IDNLAQLQRR
ILDTLWGLLK PGGTLLYATC SILPKENMAQ IQQFLADTPD ASLSPILKTE TPDKPGRQIT
PGEQQMDGFY YARLVKSQD
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