| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1563 |
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| Symbol | |
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| ID | 6133996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 1744279 |
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| End bp | 1747464 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641641829 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001768498 |
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| Protein GI | 170739843 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0482838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCG CGATCTTCGT CGACCGGCCG CGCCTCGCGC TGGTGATCGC CATCGTCACC
TCGATCGCGG GGGCGCTGGC GCTCCTCGCC ATCCCGGTGG CGCAGTATCC CGACATCGTG
CCGCCCCAGG TCTCGGTGAC GACGACCTAC CCGGGCGCCG CCGCCGACGT GGTCGAATCG
ACCGTGGCGC AGCCGATCGA GTCGCAGGTC GTCGGCGTCG ACAAGATGAT CTACATGAAG
AGCGTCAGCG GCAACGACGG CAGCTACACG CTCACCTGCT CGTTCGAGCT CGGCACCGAT
CCCGACATCA ATGCCGTCAA CGTCAACAAC CGGGTCCAGA TCGCGCTCGC GAAACTCCCC
GAGGACGTCC GCAAGCAGGG CGTCACGGTC AAGAAGAAAT CCTCCGCCCT GCTCGGCGTG
CTCGCGGTCT ACTCGCCGAA GGCGATCCAG GACCCGCTCT TCATCTCGAA CTACGTGACC
ATCAACCTGC TCGACCGGAT CAAGAGCACG CCCGGCGTGG GCGACGCGAC GCTGTGGGGG
CCGCAGGATT ACGCGATGCG GGCCTGGGTG CGCAGCGACC AGCTCACCGG CCTCAACCTG
ACCACGGGCG ACGTCATCAA CGCGATCAAG GCCCAGAACG TCCAGGCCCC GGTCGGCCGC
ATCGGCGCCC GGCCGATCTC GGACGAGCAG CAGCTCCAGC TCAGCATCCA GACCCAGGGG
CGGCTCACCT CGCCCGAGCA GTTCCGCAAC GTCGTGCTGC GCACCAACCC GGACGGGTCG
CTGCTGCGGC TCGGCGACGT CGCCCGGATC GAGCTCGGCG CGGCGAGCCT CGACCGCGAG
ACGCGGCTCA ACGGCAGCCC GGCCACGGTC ATCGCGATCT ACCAGTCGCC CGGCGCCAAC
GCGATCGCGA CCCTGAAGGA GGTCAAGGCG CGGGTCGCCG CGCTGGCCAA GGCCTTCCCG
GAGGGGCTGG AATGGAAGGT CACCTACGAC CCGACCGCCT TCATCACCGA GACCGTGCAC
GAGGTGCAGA AGACGCTCGT CGAGGCCTTC GTGCTCGTCG TGATCGTGGT GTTCCTGTTC
CTCGGCAGCC TGCGGGCGAC GCTGATCCCG ACGGTCGCCG TGCCGGTGAG CCTGATCGGC
ACCTTCATCG CGCTCAAGGC GGTCGGCTAC TCGGCGAACT CGGTCTCCCT GCTCGCCATG
GTGCTCGCCA TCGGGATCGT GGTCGACGAC GCCATCGTGG TGGTCGAGAA CGTCGAGCGG
GTGATGGAGG AGCACCCGGA CCTGTCCCCG CGCGAGGCGA CGAAGCGCGC CATGGCGGAG
ATCACCGCGC CGATCATCGC GATCACCCTG GTGCTGCTCT CGGTCTTCGT GCCGGTCGCC
TTCGTGCCGG GCATCTCGGG CGAGCTGTTC CGCCAGTTCG CGGTCGCGGT CGCGGTCTCG
ATGTTCCTCT CGGCCATCAA CGCGCTCACG CTCTCGCCCG CGCTCTGCGG CGTGCTGCTG
AGACCCCATC ACGGGCCACG GCGCGGCATC ATGGGATTCG TGATGCGGGC GATCGACGCC
GTCCGCGACG GCTACGGCGC CGCGGTGGCC CGCATCGTGC GCCTCTCGAT CATCGGCCTC
GTGCTGTCGC TCGCGGCGGC CTGGGGCACG GTCGAACTGG CGAAGATCAC GCCCACGGGC
TTCCTGCCGG AGGACGATCA GGGCGCCTTC TTCGTGGTGG TGCAGCTTCC CGAGGGCGCT
TCGGTCGCGC GGACCTCGGA CGTGGCGGCG AAGGCCGAGG CCATCCTGCG CGAGGAGCAC
GCCGTCGCCG ACGCGACGAC CGTGGTCGGC CTCAACTTCA TCGACAATTA CTCGCAGAGC
AACGCCGCCT TCCTGGTCGT CACGCTCAAG CCGTTCGAGG AGCGCAAGGG GGCGGGCGAC
GGCGCCGCGG CCCTGATCGC GCGGCTCGGC CAGCGCTTCC GCGAGGTGCC GGGCGGCCTC
GTCGTGCCCC TCGCGCCCCC GCCGATCATC GGGCTCGGGA CCGGCGGCGG CTTCGCCTAC
GTGCTGGAGG ACCTGCGCGG CGGCGATCCG AAGGAACTCG CCCAGGCCCT GCGCGGCCTC
ATCGTCGCGG CGAACCAGGA GCCGAAGCTC AGCCGCGTCT TCAGCACCTT CTCGGCGACC
AACCCGTCGG TCTACCTCGA TATCGACCGC AACAAGGTCC AGATCCTGGG CGTGTCGCTC
GACAGCGTGT TCCAGGCGCT GCAGGCCTCG CTCGGCGGCT ACTACGTCAA CGACATCAAC
CTGTTCGGCC GCACCTGGCA AGTTCAGGTC CAGGCCGAGG CGGCCGATCG CCAGAGCATC
GACGACATCT ACCGCATCAA CGTGCGCAAC AAGGACGGCC AGATGGTGCC GCTGCGCAGC
CTCGCCGAGG TGCGGATCGT CGTCGGACCG CCCTCGCTGA TCCGCTACAA CAACCTGCGC
GCGGTGACGG TGCAGGGCGG GCCGGCGCCC GGCATCTCCT CGGGCCAGGC CCTCGCCGCC
ATGGAGGCCG TCGCGGCCCG GACCCTGCCG ACCGGCTTCG GCGGGGAGTG GACCGACACC
GCCTTCCAGG AGAAGCGGGC GGAGGGGAAG ACCGCGATCA TCCTCGCCTT CGCGGTGCTG
TTCGCCTTCC TGTTCCTGGT CGGCCTCTAC GAGAGCTGGA CGATCCCGGT GCCGGTCCTG
CTCTCGGTCA CCGTCGGCAT CGTCGGCGCC TACGCGGCGA TGGTCTGGGG CGGGCTCACC
CTGGACCTCT ACGCGCAGAT CGGCATGGTC GTGCTGATCG GGCTCGCCGC CAAGAACGGC
ATTCTCATCG TCGAGTTCGC CAAGGAGCAG CGGGAGAAGG GCGTCGCGCT GCGCGAGGCC
GCGACCGAGG GGGCGCGGCT GCGCTTCCGC CCGGTCATGA TGACCTCCTT CGCCTTCATC
CTCGGCCTGC TGCCGCTCGT GATCGCCACC GGCGCCTCGC AGCTCGCCCG GCGCAACGTC
GGCACGCCGG TCTTCGGCGG CATGGTCGCC GCGTCCTTCC TCGGCATCTT CGTGATCCCG
CCGCTCTACG TGGTGTTCCA GGGCCTCCGC GAGCGGGCGT GGCGGCTGCT CGGCGGCAAG
AAGCAGCAAC CGGCGACGCG GCCGGCCGCG CCGACCGGTG CGGCGGGGCA CCAGCCGGCG
GAGTAG
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| Protein sequence | MLSAIFVDRP RLALVIAIVT SIAGALALLA IPVAQYPDIV PPQVSVTTTY PGAAADVVES
TVAQPIESQV VGVDKMIYMK SVSGNDGSYT LTCSFELGTD PDINAVNVNN RVQIALAKLP
EDVRKQGVTV KKKSSALLGV LAVYSPKAIQ DPLFISNYVT INLLDRIKST PGVGDATLWG
PQDYAMRAWV RSDQLTGLNL TTGDVINAIK AQNVQAPVGR IGARPISDEQ QLQLSIQTQG
RLTSPEQFRN VVLRTNPDGS LLRLGDVARI ELGAASLDRE TRLNGSPATV IAIYQSPGAN
AIATLKEVKA RVAALAKAFP EGLEWKVTYD PTAFITETVH EVQKTLVEAF VLVVIVVFLF
LGSLRATLIP TVAVPVSLIG TFIALKAVGY SANSVSLLAM VLAIGIVVDD AIVVVENVER
VMEEHPDLSP REATKRAMAE ITAPIIAITL VLLSVFVPVA FVPGISGELF RQFAVAVAVS
MFLSAINALT LSPALCGVLL RPHHGPRRGI MGFVMRAIDA VRDGYGAAVA RIVRLSIIGL
VLSLAAAWGT VELAKITPTG FLPEDDQGAF FVVVQLPEGA SVARTSDVAA KAEAILREEH
AVADATTVVG LNFIDNYSQS NAAFLVVTLK PFEERKGAGD GAAALIARLG QRFREVPGGL
VVPLAPPPII GLGTGGGFAY VLEDLRGGDP KELAQALRGL IVAANQEPKL SRVFSTFSAT
NPSVYLDIDR NKVQILGVSL DSVFQALQAS LGGYYVNDIN LFGRTWQVQV QAEAADRQSI
DDIYRINVRN KDGQMVPLRS LAEVRIVVGP PSLIRYNNLR AVTVQGGPAP GISSGQALAA
MEAVAARTLP TGFGGEWTDT AFQEKRAEGK TAIILAFAVL FAFLFLVGLY ESWTIPVPVL
LSVTVGIVGA YAAMVWGGLT LDLYAQIGMV VLIGLAAKNG ILIVEFAKEQ REKGVALREA
ATEGARLRFR PVMMTSFAFI LGLLPLVIAT GASQLARRNV GTPVFGGMVA ASFLGIFVIP
PLYVVFQGLR ERAWRLLGGK KQQPATRPAA PTGAAGHQPA E
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