Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0446 |
Symbol | |
ID | 6131846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 529927 |
End bp | 531099 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641640769 |
Product | ornithine decarboxylase |
Protein accession | YP_001767444 |
Protein GI | 170738789 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0877313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATGA CCGATCGCAT CCGCGATTTC CTGCGCGCTC GCCGTGACCT CGGCCGTGAC GAGGGGCCGG TGATGGTCCT CGACCTCGAC GTCGTGCGCG ACAATTACCA CGCCTTCGCC CGCGCCCTGC CCGACACCCG CGTCTTCTAC GCCGTGAAGG CGAATCCGGC GCCGGAGGTG CTCGGCCTGC TGGCCTCGCT CGGCTCCTGC TTCGACACCG CCTCGGTGGC CGAGATTCAG ATGGCGCTCG CCGCCGGCGC CACCGCCGAC CGCATCTCCT TCGGCAACAC CATCAAGAAG GAGCGCTGCA TCGCCCGCGC CCTCGCGCTC GGCGTGCGCC TGTTCGCGGT GGATTGCGAG GCGGAGGTCG AGAAGATCGC CCGCGCGGCC GCTTGCGCCG ACGTGGCGCC CGAGGAGGTG CAGGTGTTCT GCCGCATCCT CTGCGACGGG GCCGGCGCCG AGTGGCCGCT CTCGCGCAAG TTCGGCTGCG TGCCCGACAT GGCGGTCGAC GTGCTGGAGC ACGCGCACCG GCAGGGCCTG CGCGCCTACG GCGTCTCCTT CCACGTCGGC TCGCAGCAGG GCAATACGGA AGCCTGGGAC GGGGCGCTGG CCTCGGCCGC GATGATCTTC CGGGAATGCG CCGAGCGCGG CATCGCGCTC GCGATGGTCA ATCTCGGCGG CGGCTTCCCG ACCAAGTACC TCAAGGAGGT GCCGGGCGTG GAATCCTACG GTGGCGCGAT CTTCCGGGCG CTCACCAAGC ACTTCGGCAA CCGCATGCCG GAGACGATCA TCGAGCCGGG CCGCGGCATG GTCGGCAACG CGGGCATCAT CGAGGCGGAG GTCATCCTCG TCTCGAAGAA GTCCGAGGCC GCCGACGAGG TGCGCTGGGT CTACCTGGAC ATCGGCAAGT TCGGCGGGCT CGCCGAGACG ATGGACGAGT CGATCCGCTA CCGCATCCGC ACCGACCACG ACGAGGACCG CATGGTCCCC TGCGTGCTCG CCGGACCGAC CTGCGATTCG GCGGACGTGC TCTACGAGAA GATCCCCTAC CCGCTGCCCG TGTCGCTCTC CATCGGCGAC AAGGTGCTGA TCGAGGGGGC CGGCGCCTAC ACCACCACCT ACGCGGCGGT GGCGTTCAAC GGCTTCCCGC CGCTGCAATC CTACGTGATC TGA
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Protein sequence | MIMTDRIRDF LRARRDLGRD EGPVMVLDLD VVRDNYHAFA RALPDTRVFY AVKANPAPEV LGLLASLGSC FDTASVAEIQ MALAAGATAD RISFGNTIKK ERCIARALAL GVRLFAVDCE AEVEKIARAA ACADVAPEEV QVFCRILCDG AGAEWPLSRK FGCVPDMAVD VLEHAHRQGL RAYGVSFHVG SQQGNTEAWD GALASAAMIF RECAERGIAL AMVNLGGGFP TKYLKEVPGV ESYGGAIFRA LTKHFGNRMP ETIIEPGRGM VGNAGIIEAE VILVSKKSEA ADEVRWVYLD IGKFGGLAET MDESIRYRIR TDHDEDRMVP CVLAGPTCDS ADVLYEKIPY PLPVSLSIGD KVLIEGAGAY TTTYAAVAFN GFPPLQSYVI
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