| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1542 |
|---|
| Symbol | |
|---|
| ID | 5189265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1599277 |
|---|
| End bp | 1600734 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640591393 |
|---|
| Product | sucrose phosphorylase |
|---|
| Protein accession | YP_001272124 |
|---|
| Protein GI | 148544754 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.296567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCA AAAATGAAGC AATGTTAATT ACTTACTCTG ACTCAATGGG TAAAAATATT
AAAGAAACTC ATGAAGTATT AAAGAACTAT ATCGGTGATG CAATCGGCGG TGTTCACTTA
CTTCCATTCT TCCCATCAAC TGGTGACCGT GGTTTTGCAC CATACCGTTA CGATGTTGTT
GATTCTGCTT TTGGTAACTG GGATGATGTT GAAGCATTAG GTGAAGACTA CTACTTAATG
TTTGACTTCA TGATTAACCA TATTTCCAAG AAGTCTGAAA TGTACCAAGA CTTCAAGAAG
AAGCACGATG ATTCTAAGTA CAACGACTTC TTTATTCGTT GGGAAAAGTT CTGGGAAAAA
GCTGGTAAGA ACCGTCCAAC TCAAGAAGAT GTTGATTTAA TTTACAAGCG AAAGGATAAG
GCTCCTAAGC AAGAAATTAC CTTTGATGAT GGTACTACTG AAAACTTATG GAACACTTTC
GGTGAAGAAC AAATTGATAT TAATGTTAAG AGTAAGGTAG CTAACGAATT CTTCAAGGAA
ACATTAATTG ACATGGTTAA GCACGGTGCA GATATGATTC GTCTTGATGC CTTTGCTTAC
GCTATTAAGA AGGTTGGTAC TAATGATTTC TTCGTTGAAC CTGAAATCTG GGATCTTTTA
AATGAAGTTC AAGATATTTT GGCTCCTTAC AAGGCCATCA TCCTTCCTGA AATTCACGAA
CACTACACCA TTCCACAAAA GATTTCACAA CATGACTTCT TCATCTATGA CTTTACCTTA
CCAATGACTA CTCTTTATAC CCTTTACTCT GGTAAGACTA ACCGCCTTGC TAAGTGGTTA
AAGATGTCAC CGATGAAGCA ATTTACTACT CTTGATACTC ATGATGGTAT TGGGGTTGTT
GATGCTAAGG ATATCTTAAC TGATGATGAA ATCGAATATG CATCCAATGA ATTATACAAG
GTTGGTGCTA ACGTTAAGCG GAAATACTCA AGTGCTGAAT ACAACAACTT GGATATTTAC
CAAATTAACT CTACTTACTA CTCTGCATTA GGTGACGATG ACAAAGCTTA CTTGCTTTCT
CGGGCATTCC AAGTATTTGC ACCTGGTATT CCAATGGTTT ACTATGTTGG TTTACTTGCT
GGTTCAAATG ACCTTGAATT ACTTGAAAAG ACTAAGGAAG GTCGGAACAT CAACCGTCAC
TACTACACTA AAGAAGAAGT TGCACAAGAA GTTCAACGTC CAGTAGTTAA GAATCTCTTA
GACTTACTTG CATGGCGGAA TAAATTTGCA GCCTTTGATC TTGATGGTTC AATTGAAGTG
GAAACACCAA CTGAAACAAC TATCAAGGTT ACGCGGAAAG ATAAGGATGG CAAGAATGTG
GCTGTTCTTG ATGCTGATGC TGCTAACAAG ACTTTCACTA TTACAGCTAA TGGTGAAAAA
GTGATGGAAC AAAAATAG
|
|---|
| Protein sequence | MPIKNEAMLI TYSDSMGKNI KETHEVLKNY IGDAIGGVHL LPFFPSTGDR GFAPYRYDVV
DSAFGNWDDV EALGEDYYLM FDFMINHISK KSEMYQDFKK KHDDSKYNDF FIRWEKFWEK
AGKNRPTQED VDLIYKRKDK APKQEITFDD GTTENLWNTF GEEQIDINVK SKVANEFFKE
TLIDMVKHGA DMIRLDAFAY AIKKVGTNDF FVEPEIWDLL NEVQDILAPY KAIILPEIHE
HYTIPQKISQ HDFFIYDFTL PMTTLYTLYS GKTNRLAKWL KMSPMKQFTT LDTHDGIGVV
DAKDILTDDE IEYASNELYK VGANVKRKYS SAEYNNLDIY QINSTYYSAL GDDDKAYLLS
RAFQVFAPGI PMVYYVGLLA GSNDLELLEK TKEGRNINRH YYTKEEVAQE VQRPVVKNLL
DLLAWRNKFA AFDLDGSIEV ETPTETTIKV TRKDKDGKNV AVLDADAANK TFTITANGEK
VMEQK
|
|---|
| |