Gene Lferr_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2176 
Symbol 
ID6878167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2159309 
End bp2159707 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID642790035 
Producthypothetical protein 
Protein accessionYP_002220587 
Protein GI198284266 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000345804 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGACT ACCACTATCT GGAGGATCAG GGCGAAAAGT CGGTGGTCAT CGTCATGACC 
AGCGGGCCGA GCACCGCGCA TCGCTGTGCG ACGCCGTTTT ATCTGGGTGC CCTGTTGTCT
TCCATGGATG CGGAGGTTAA GATTTTTTGC ACGATGGAGG CGGTCCGGCT GATGCAGACG
GGCGTTGCGG AAAATCTTTC GGCGATGGCT GGCGGCAAGC GGATTATCGA CTTCATTCGT
GACGCCAAAA ATGCCGGAGT GGAAATCCAG GTCTGTCGAC CGGCGCTTCC CGGCTATGAG
ATCGAGGCCG ACAACCTGAT CGACGAAGTG GATGCGGTGG CTTCTGCCGG TGATCTGGCC
GATCTGATTC TGTCGGTTGA CCGACTGCTG TTTTTTTAA
 
Protein sequence
MSDYHYLEDQ GEKSVVIVMT SGPSTAHRCA TPFYLGALLS SMDAEVKIFC TMEAVRLMQT 
GVAENLSAMA GGKRIIDFIR DAKNAGVEIQ VCRPALPGYE IEADNLIDEV DAVASAGDLA
DLILSVDRLL FF