Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2171 |
Symbol | |
ID | 6878162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2154272 |
End bp | 2155408 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642790030 |
Product | Radical SAM domain protein |
Protein accession | YP_002220582 |
Protein GI | 198284261 |
COG category | [R] General function prediction only |
COG ID | [COG2516] Biotin synthase-related enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00159358 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000651126 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTGCGG TAGCCCAAGA AAATTCTCAG CCCTTGAACT TTTATCGCCC GGATTATTTC GTCAAAACGC CGACGATGCG GTCACCTGAA TATGTGCAGC TCAGCACCGC GGCGGCGATT ACGCTGGGTC TGGTGCCTGG GGTGATGCAC CGCACCTCCT GTACGAATTG TCTGAATCTA CTGATGACCT ACCCGGAAGG CTGTCGTGCC AACTGCACCT ACTGCGGTCT GGCCCGGCAT CGGGAAGAGA GCCGCGATTA CGCCGACCGC AACTTCATCC GGGTGGACTG GCCGACGGTG CGCGTGGATG AAATGCTCGA ACGTATCGCC AAGAACAGCG ACAAGGGTCA GTTCCAGCGT ATGTGCATCA GTATGATCAC CCACCCCGAT TCAGACCATG ATACACAAGT CATGCTGAAG CGCTGGATGG AGGTGGCGCC CCATATCCCC GCTTCCATTC TCTCCAACCC GACCACCATG GATAAACAGG ATCTCATCGA CCTCAAGGCG ATGGGCGCGG ATATCTTTAC CGTCGCCCTG GATGCGGTGA CGCCGGAAAT CTTCGAGCGT ACCCGTGGCA AGACGGTGCA GAGCCCCCAT TCCTGGGACA AGTACTGGCA GACCATCGAA TGGGCGGCAG AGATTTATGG TCCCGAAAAA TTCGGTGCGC ATCTGATCTG CGGCATGGGC GAGACCGAGC AGGAAATCCT CGCCGTTTGT CAGAAGATGA AAGACATGGG TGGCCATAAC CACATGTTTG CCTTCTTCCC CGAGAAAGGC TCCATGATGG AGGATTGGGA CGCCGTGCCC CAGGACCATT GGCGCCGGGT GCAGTTGGGC CGCTTCCTCA TCGATTATGC GGGTGGCCGT TATGAGGATA TGGAGTTTGA TCAGTATGGT CGCGTGCTGA GTTTCGGTTA TCCCCAGGCG GAGCTGGAAG ACATCATCGA CTCGGGTAAG CCCTTCCAGA CCTCCGGCTG CCCAGGGAAG GATGATGAAG AAGTCAGCGC CTGTAATCGG CCTTATGGGG ATTCCTCGCC TTCGGACATC CGCTCTTTCC CCTTTGCGTT GAACAGGGAA GATGTGGAAA TCGTGCGTCG CCAGATGCGG TTGCAGGACT TGCGGTTTCC CGGATAA
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Protein sequence | MSAVAQENSQ PLNFYRPDYF VKTPTMRSPE YVQLSTAAAI TLGLVPGVMH RTSCTNCLNL LMTYPEGCRA NCTYCGLARH REESRDYADR NFIRVDWPTV RVDEMLERIA KNSDKGQFQR MCISMITHPD SDHDTQVMLK RWMEVAPHIP ASILSNPTTM DKQDLIDLKA MGADIFTVAL DAVTPEIFER TRGKTVQSPH SWDKYWQTIE WAAEIYGPEK FGAHLICGMG ETEQEILAVC QKMKDMGGHN HMFAFFPEKG SMMEDWDAVP QDHWRRVQLG RFLIDYAGGR YEDMEFDQYG RVLSFGYPQA ELEDIIDSGK PFQTSGCPGK DDEEVSACNR PYGDSSPSDI RSFPFALNRE DVEIVRRQMR LQDLRFPG
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