| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2150 |
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| Symbol | |
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| ID | 6878141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2134790 |
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| End bp | 2136046 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642790009 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002220561 |
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| Protein GI | 198284240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000322479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00030161 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCGTC TTTTTCATCC GGCCACTGCC GTGCTCATCA TCTGCGCTGG CACTTTCGGG
CCATTTTCCG GTATCTGGGC GGCGGAGAAT CCAGCGACCC GGGGAAACGG CCCTATCCCC
GATACAACCG GCCTTTCTCC CAAATATTTG CCCGCTTACC GTCATCTGAT AGACGGTATC
TCCTGGGCTG GGCATGCCGA CAGTGAGCTA TTTTCCAACC TCAGCGGCGG CATTCGCCGG
GGCAGCGAGG GCAACCTTGC CGGCCAGATT GGTGGCGAGT ACGACACCGA GAAGGCCGGT
CTCTGGAAGG GCGGCAAATT TAGCCTCTCC CTCATGGGCA TTTATAGCAG CAAAGTCCAG
CAAAATTATA GCGGCGACAT CCAGACGGCC AGCAACATCT GGGCACCTGA CGCGATTCGT
TTTTACGATG CCGCCTTTCG CCAACGCTGG ACGGACTGGC TCAACACCCG TGTCGGTTAC
ATGGATGTGA ATTATTACTT CGACGTCACT GCCAATGCCT TGCAGCTCAT CAACAGCTCC
TTTGGCATAA CGCCGACCAT GACCGTCAAT GTCCCGGGTA CCGCCACCTA TCCTTATTCG
GGCCTAGGGT TCCTGGTGGG CATCCATAAC GAGCACCTGA GCAGCAAGGT TGCAGTATTT
CAGGGCGACC CACAGCACCA GACCTCCGCC TTCGATCGCG GCTACATGGC GTTGTGGGAA
GGTGGCCTGC ACTGGGGCAA AAAAGATGAC GAGGATCTGG AGGACAATAC CGACAATTAC
GGCAGGTATA TACTCAAAAT AGGTGGTTGG CATTATCAAC AATCCAACCC TGACCTCTAC
GGGCTTTCCC CGACCACCTC CGGCATCTAT GCCGTGGCCG AGGGCAATTG GGATCTATCT
GGAGAACGGG AACTGGGCGC TTTTATCCAG ATGGGCGGTG CGCCGCAGAA CTTCAATCCA
GTACCTTGGT ATCTGGGCAT CGGTTTGCGC CTGGGCCATC CCTTCGCCAG TCGGCCGGAT
GACAGCCTGT CCGTGGGCAT GGCTAAGGCA TGGCTACGCT CCGGACCCGT GGCGGATGCC
CTGGGTGTGA AGCCCGCGGA TATCCGCGGC GCGGAAACGT CCTATGAATT GACCTACGTG
GCGAAACTTA CGGAGCATGT CAGTCTGCAG CCGGACCTTC AGTATATTCA GCACCCCAAT
GGCTATTATC CGGATAGCAC CGTTGGCCTT CTGCGCGTAC ATGTTGAATT CTTCTGA
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| Protein sequence | MPRLFHPATA VLIICAGTFG PFSGIWAAEN PATRGNGPIP DTTGLSPKYL PAYRHLIDGI
SWAGHADSEL FSNLSGGIRR GSEGNLAGQI GGEYDTEKAG LWKGGKFSLS LMGIYSSKVQ
QNYSGDIQTA SNIWAPDAIR FYDAAFRQRW TDWLNTRVGY MDVNYYFDVT ANALQLINSS
FGITPTMTVN VPGTATYPYS GLGFLVGIHN EHLSSKVAVF QGDPQHQTSA FDRGYMALWE
GGLHWGKKDD EDLEDNTDNY GRYILKIGGW HYQQSNPDLY GLSPTTSGIY AVAEGNWDLS
GERELGAFIQ MGGAPQNFNP VPWYLGIGLR LGHPFASRPD DSLSVGMAKA WLRSGPVADA
LGVKPADIRG AETSYELTYV AKLTEHVSLQ PDLQYIQHPN GYYPDSTVGL LRVHVEFF
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