Gene Lferr_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1909 
Symbol 
ID6877894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1900636 
End bp1901196 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID642789779 
ProductSUA5/yciO/yrdC domain 
Protein accessionYP_002220337 
Protein GI198284016 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCC GCCATCCGCG TCGTCAGGAT ATTCGCCGAG GGGTTGCGCA TATACGGCGC 
GGCGGGGTCA TCGCCTATCC CACGGAAGGG GTCTGGGGGC TGGGCTGTGA CCCGCGCCGG
CGCCGCGCCC TGCACCGAAT TCTGGCCCTG AAGGGGCGGC CACGGTTTAA AGGCGTTCTT
CTGGTGGCCG GCCGGACAGC CGAAACCCGG CGTTACTGGT CTGCGCAAGG TACAGATCAG
GCGCTGCTGG CGCGATTCTG GCCCGGCACG ACGCTGGTGC TCCCGGCCAC GCCCCAGGTC
CCCTTCTGGA TACGCGGACG CCATGCGGGC GTTGCGGTGC GGATCAGTAG CCATCCCGCT
ATCGTCGCGT TGTCGCGGGT CTTCGGCGGC GCCATGGTCT CCACCAGTGC CAATCCGGCA
GGGAAACAAC CGGCCCGTGA CCTGCGCACC TTATACCGCT ATTTTGGCCG CTCTCTGTGG
GTACTGCCAG CACGGTTGGG GGGGCAACAT CATCCCAGCC GCATTGTCGA TGCCCGCAGC
GGTCGTGTCT TACGGGAGTG A
 
Protein sequence
MLPRHPRRQD IRRGVAHIRR GGVIAYPTEG VWGLGCDPRR RRALHRILAL KGRPRFKGVL 
LVAGRTAETR RYWSAQGTDQ ALLARFWPGT TLVLPATPQV PFWIRGRHAG VAVRISSHPA
IVALSRVFGG AMVSTSANPA GKQPARDLRT LYRYFGRSLW VLPARLGGQH HPSRIVDARS
GRVLRE