| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0979 |
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| Symbol | |
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| ID | 6876945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 953103 |
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| End bp | 954974 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788858 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_002219432 |
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| Protein GI | 198283111 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0363417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG AACGGGTAGA GCAGTTCGAG AACACTGACG GTGCCGTGGA CAGAGCCTTC
GTTCCCGGAG AGTTTCTGCG GACGTTGACC AGCCAGCCCG GTATTTATCA GATGTTCGGC
CAGGGCAGTC GCCTGCTCTA TGTGGGTAAA GCCCGCAATC TCCGGCGCCG CGTGAGCTCC
TATTTTCAGA AGCAGCGCCA TACGCCAAAA ACGCTGGCGA TGTTGGCGCA GGTAACGCGG
GTGGAGGTGG TGGTCACCCA CACAGAGACG GAAGCGCTGG TGCTGGAGGC GAATCTGATC
AAGCGCCACC ACCCGCCTTA CAATATCCTG CTGCGCGATG ACAAGAGTTA CCCCTATCTG
TTCATAGAAA CCGGTCATGG CACGCCGCGC ATGAGTTTGC ACCGGGGGGC GCAGAAGGGC
AAAGGGCACT ACTTCGGTCC GTATCCGGCC GTTACTGCGT TACGCGAGAG TATGGTGCTA
TTACAGAAAG CCTTTCGATT GCGGACCTGT GAGGATCATA CTTTTCACCA CCGCAGCCGG
GCTTGTTTGC AGTTCCAGAT TCGTCGTTGC AGCGGCCCTT GTGTTGGGCA TATCAGCGGG
GAGGATTACG CGCGGGATGT GGCGGACACG ATTCGCTTTC TGGAAGGAAA GAGCGACGAA
GCGATTCGCA GTCTGGGGGA GCGTATGCAA GCGGCGGCTG AGCAACTGGA TTTCGAGGAG
GCAGCGCGAC GCCGTGACCA GATCGCCGCG TTGTCCAAGA TTCAGGAGCG TCAGTACGTG
GCGCAGGCGG GTGGCGGCGA TTTTGATGTG CTGGCGGCAG CACAAGAGAA TGGACAGTGG
GTGGTGTACG TCAGTTTTAT CCGCAATGGA CGGCAGTTGG GTGGGCGCTC CGTTTTTCCG
CGGCATACCG AAGAAGTGCG TGCGCCGGAC GTGCTCGCTG CCTTTCTCAT GCAGTTCTAC
AGCGATAAAG AGGTGCCGGG GAATCTGCTG GTCAATGTGC TGCCGCGTTC ACCGACCTCC
CTGGCGGAGG CGCTGGGCAG CGAAGCCGGG CACAGGGTCA TGATCGATCA GCCCCAGCGC
GGTCCACGCA AGCGCTGGAT GGCGTTAGCG CTGACCAACG CCATGGGGGC GTTGCGCCAG
AGGACGCAGA CGGCCGGCGC GGGACGGCGG CGCATGCTCC TGTTGCAGGA GCTCTTTCAA
CTCCCGGAGA TACCGCAGCG AGTAGAGTGT TTTGACATCA GTCATACCCG AGGCGAGGTG
GCTGTGGCAT CTTGTGTGGT TTTCGGTGAC GATGGGGCAC TGAAGAACGA ATACCGCCGC
TTCAATATTC GCGATATCCG GGGCGGCGAC GATTACGCGG CTATGGAGCA GGCCGTCCAT
CGCCGCTATG GGCGGCTGCA GAAAGAGGGC CTGGCCTTGC CGGAGATCGT CTTCATTGAC
GGTGGTGCCG GACAGGTGGC TCGTGCGCAG GCGGCTCTGG ACGCATTGGA GATCGGTTGC
ATCCAGTTGT GCGGGGTGGC GAAGGGGACG ACGCGGCGCC CAGGGCTGGA GATGCTGCAT
ATCCCCGGGT GGGCGGTCCC GCGGCAATTG GACGACGATG ATCCGGCACT GCTGGTAATT
CAGGAAATCC GCGATGAAGC CCATCGTTTT GCCATTACCG GTCACCGCGC GCGCCGCGGC
AAAGCACGGC AGGAATCCGA TCTGGATGGC ATCTCCGGGA TCGGGCCGAA ACGGCGGGTG
GCGTTGTTAC GCGCATTTGG CGGCTTACGC GGTATTCGTG ACGCCGGTAT GGAGGATTTG
CAGCGCGTTG AGGGTATCCA TCTGGAGCTC GCGCAGCGGA TATATGATTT CTTTCACGTA
GGACGTGCCT GA
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| Protein sequence | MDFERVEQFE NTDGAVDRAF VPGEFLRTLT SQPGIYQMFG QGSRLLYVGK ARNLRRRVSS
YFQKQRHTPK TLAMLAQVTR VEVVVTHTET EALVLEANLI KRHHPPYNIL LRDDKSYPYL
FIETGHGTPR MSLHRGAQKG KGHYFGPYPA VTALRESMVL LQKAFRLRTC EDHTFHHRSR
ACLQFQIRRC SGPCVGHISG EDYARDVADT IRFLEGKSDE AIRSLGERMQ AAAEQLDFEE
AARRRDQIAA LSKIQERQYV AQAGGGDFDV LAAAQENGQW VVYVSFIRNG RQLGGRSVFP
RHTEEVRAPD VLAAFLMQFY SDKEVPGNLL VNVLPRSPTS LAEALGSEAG HRVMIDQPQR
GPRKRWMALA LTNAMGALRQ RTQTAGAGRR RMLLLQELFQ LPEIPQRVEC FDISHTRGEV
AVASCVVFGD DGALKNEYRR FNIRDIRGGD DYAAMEQAVH RRYGRLQKEG LALPEIVFID
GGAGQVARAQ AALDALEIGC IQLCGVAKGT TRRPGLEMLH IPGWAVPRQL DDDDPALLVI
QEIRDEAHRF AITGHRARRG KARQESDLDG ISGIGPKRRV ALLRAFGGLR GIRDAGMEDL
QRVEGIHLEL AQRIYDFFHV GRA
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