Gene Lferr_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0893 
Symbol 
ID6876858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp853195 
End bp853686 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID642788774 
Productacetolactate synthase, small subunit 
Protein accessionYP_002219349 
Protein GI198283028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.254483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC GCCATATCAT TTCCATTCTG CTGGAAAACG AGGCGGGAGC CCTGTCTCGG 
GTGGCGGGGT TGTTCTCGGC GCGTGGCTAT AACATCGAGG CGATGACGGT CGCGCCGACC
CATGACCCGA GTATCTCGCG GATGACCGTG GCTACCCGCG GCTCCGACGA GATCATGGAA
CAGGTCCTCA AGCAGTTGAA CAAGCTGGTG GAAGTGGTCC GCGTCCATGA CCTGACCGAA
GGACCGCATA TCGAGCGTGA GTTGATGCTC GTCAAGGTCC ATGCCATGGG GCCGGATCGC
GAGGAAGTCA AAAGGCTGTC GGATATTTTC CGGGGGCGCA TCATCGACGT GACGGACCGC
TCCTATACCA TGGAACTGAC TGGTACCGGC GAGAAGCTGG ATGCTTTTAT CCAGTCTCTT
GATCCCGGCA TGGTCATCGA AGTGGTGCGC AGCGGGGCCA GCGCCATCAG TCGCGGCGCC
AAGGCCATAT AG
 
Protein sequence
MTMRHIISIL LENEAGALSR VAGLFSARGY NIEAMTVAPT HDPSISRMTV ATRGSDEIME 
QVLKQLNKLV EVVRVHDLTE GPHIERELML VKVHAMGPDR EEVKRLSDIF RGRIIDVTDR
SYTMELTGTG EKLDAFIQSL DPGMVIEVVR SGASAISRGA KAI