Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0782 |
Symbol | |
ID | 6876746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 742221 |
End bp | 744371 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642788663 |
Product | Cytochrome-c oxidase |
Protein accession | YP_002219239 |
Protein GI | 198282918 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000788567 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTAG ATTTAGCCGG GGGCTGGAAC CCCATGCTGG GGCGCCTTGC CTGGTCTCAG ATTCCTTACG ACAACCCCAT CCTGGCGCCG CTGTTTGTCG CGGTGGTCAT TGGGGCCATC CTGGTGCTGG GTCTGATCAC GTACTACGGG AAATGGACCT ACCTGTGGAA GGAATGGCTG ACCACCGTGG ATCACAAAAA ACTAGGGGTG ATGTACATCC TCATCGGTTT GGTGATGCTG TTCCGGGGTT TCATCGATGG TCTGATGATC CGGACACAGC AGGCCTGGGC GGTAGGCCCA CATTCCTCGG GAGTGTTCGG TGCGACGCAC GGTTACCTGA CTCCGTTCCA TTTCGGGCAG GTCTACAGTG CCCATGGGGT GATCATGATT CTGCTGGCAG CCACGCCGTT GCTCGTCGGC TTCATGAACA TCATCGTGCC CATTCAGATC GGTGCCCGGG ACATGGCCTA CCCCTACCTG AATGCGTTGG GGCTATGGTT CACCGCCGCG GCCGGGGCAT TGATCATGAT TTCCCTGTTC GTGGGTGATT TCGCGCACAA TGGCTGGTTC GGTTATGCAC CGATCTTCGA GTTGCAATAC AGCCCGGGCG TCGGTGTGGA CTACTGGATA TGGACCATGG AGTTGTTGGC GCTGGGGACC ACCTTGGGCG GCATCAACAT TCTGGCGACC ATCATCAAGA TGCGCGCGCC GGGTATGACC TGGGGTCGTT TGCCGATCTT TGTCTGGGCT TCGATTGCGT CGAACGTGAT TGCCCTGACT TCTTTTCCGG CACTGCAGGT GGCACTTGCA TTGGTTGCTG CAGACCGCTA TCTGGGCGCG CATTTCTTCA CGGCGGGTCT GGGTGGCAAT CTGATGCTCT ATACCAATCT ATTCTGGATA TGGGGCCACC CGGAAGTCTA TTTCGTGATT CTTCCGGCCT TCGGCATGAT GTCGGAAATC TTTCCGACCT TTTCCGAAAA ACCATTATTT GGCTACATGA CCATGGTACT CGCCAGTATG GCCATTGCCG GCGTTTCCTG GCTGGTCTGG CTGCATCATT TCTTTACCAT GGGCGCCGGG CCCTACGTCA ACAGCGCCTT CAGTGTGGCC ACCATGCTGG TCGGCATTCC TACGGGTGTG AAGGTGTTCA ACTGGGCATT CACCATGTAT CGTGGGCGTC TGACTTTCAA CGCCGCCATG CTGTGGGCCA TCGGCGCGCT TTTCCTGCTG CTGGTAGGCG GATTGACGGG CATGATGCTG GCGGTTCCGG CCATCAATTA CATGGTCCAC AACAGCGTTT TTGTGGTCGC GCATTTCCAT TCCATGCTGT TGACGATTGT GTACGCCATT TTTGCTTCGG TGATCTACTG GTTTCCCAAG GTCTTCGGCT TCAAGCTGAA TGAGTTCTGG GCAAAGACCA TGTTCTGGCT CTTTTCTGCC GGTACGGTGC TGGTGTTCGT GCCGATGTAC ATGCTCGGTT TCATGGGTAT GACCCGGCGT CTGGATTATG TGTTCAACAC CGCTTGGCAT CCTTATCTGC TGGTGATGGA ATTCGGTATC GTGGTGTATA CGCTTTCCGT CCTCGCATTT TTCGCGCTGC TTTATGTCAG TGTCCGCGAT CATGCGAGCA ACCAGGTTGG CGCGGATGCC TGGGGTACCT CCCGCTCGCT GGAATGGCTT ACCCATTCTC CTGTGCCATT TTATAACTTT GCCGTACTGC CGCACATCAA TGCGCGCGAT GAAGTGGCCT GGCGGCGTGA TAACGGCATC GATCATGTTC AGCCCGATCA CTATGAAGAT ATCCATATGC CCAATAATAC CGGTGTGGCC ATTGTCCTTG GCGGCCTGAC CTTTGTGCTG GGTTTCGCCC TGGTATGGCG TATCTGGTGG CTTTGTGCCT TCTCCCTGCT GGCAATCATT GCACTCGTAA TCTACCGCTC CTTCAAGGGT GATCCGGGTT ACATCATTAC CGCGGCGGAA CTGGAACAGA TGGAAAAGGC AGCTATGCGC CGGGAAGCAG GGATAGGTAA ACAGCAGCAT CGGGTCGGCG GCGGCGTATT GGGTGAGGCA ATAGCCTATG AGCGTTCTGA CCTGCCGCCA CTGGCTTCGC AGCCGAGCTC ATCCGTGGGG CTGGATCATC ATCGCAGTTG A
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Protein sequence | MLVDLAGGWN PMLGRLAWSQ IPYDNPILAP LFVAVVIGAI LVLGLITYYG KWTYLWKEWL TTVDHKKLGV MYILIGLVML FRGFIDGLMI RTQQAWAVGP HSSGVFGATH GYLTPFHFGQ VYSAHGVIMI LLAATPLLVG FMNIIVPIQI GARDMAYPYL NALGLWFTAA AGALIMISLF VGDFAHNGWF GYAPIFELQY SPGVGVDYWI WTMELLALGT TLGGINILAT IIKMRAPGMT WGRLPIFVWA SIASNVIALT SFPALQVALA LVAADRYLGA HFFTAGLGGN LMLYTNLFWI WGHPEVYFVI LPAFGMMSEI FPTFSEKPLF GYMTMVLASM AIAGVSWLVW LHHFFTMGAG PYVNSAFSVA TMLVGIPTGV KVFNWAFTMY RGRLTFNAAM LWAIGALFLL LVGGLTGMML AVPAINYMVH NSVFVVAHFH SMLLTIVYAI FASVIYWFPK VFGFKLNEFW AKTMFWLFSA GTVLVFVPMY MLGFMGMTRR LDYVFNTAWH PYLLVMEFGI VVYTLSVLAF FALLYVSVRD HASNQVGADA WGTSRSLEWL THSPVPFYNF AVLPHINARD EVAWRRDNGI DHVQPDHYED IHMPNNTGVA IVLGGLTFVL GFALVWRIWW LCAFSLLAII ALVIYRSFKG DPGYIITAAE LEQMEKAAMR REAGIGKQQH RVGGGVLGEA IAYERSDLPP LASQPSSSVG LDHHRS
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