Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0494 |
Symbol | |
ID | 6876450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 467781 |
End bp | 469880 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642788371 |
Product | elongation factor G |
Protein accession | YP_002218955 |
Protein GI | 198282634 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00353597 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000139334 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCACGCA CAACCCCTAT CGAACGCTAT CGCAATATCG GCATCATGGC GCACATCGAT GCCGGCAAAA CGACTACCAC TGAGCGCATT CTGTTCTACA CTGGCGTCTC TCATAAGATT GGCGAAGTGC ATGAAGGTAC TGCGGTCATG GACTGGATGG CGCAGGAGCA AGAGCGCGGT ATCACCATTA CCTCAGCGGC AACCACCTGC TTCTGGAAAG GTATGGATGG GCAGCGTGCC GAGCACCGGA TCAACATCAT CGACACCCCC GGACACGTCG ACTTCACCAT CGAGGTGGAG CGGTCCCTGC GGGTGTTGGA TGGCGCCATG GCGGTATTTT GTGCGGTGGG TGGTGTGCAG CCGCAATCCG AGACCGTATG GCGGCAGGCA AACAAGTACA AGGTGCCCCG TATTGCGTTC GTCAACAAAA TGGATCGTCA GGGTGCCAAC TTCAAGCGCG TTGTCGATCA GATCGCGACC AAGCTACGCG GTAACCCCGT GCCGGTTCAG TTGCCCATCG GCGAGGAAGA TCACTTTAGC GGTGTCATCG ACCTGATGAA GATGAAGTCC ATCAACTGGG ATGATGCACT GCAGGGCACG CGATTTACCG AAGAAGATAT TCCCCCTGCC TTGCAGGCGG ACGCAGAAGC TGCGCGGCAC TTCATGGTCG AAGCGATCGC GGACGCCGAT GAAGACGTGA TGATGAAATA CCTCGAAGGT GAGGAAATCA GCATTGCAGA GTTGCAGGCG GCCTTGCGCA AGGCGACGAT TTCCGGCGCC GTGGTTCCGG TGTTGTGTGG AAGTGCATTC AAGAACAAAG GGGTACAGGC TGCATTGGAC GCAGTATTGG ACTACCTGCC TTCGCCTGTC GATATCAAGC CGGTGGAAGG CACGAATCCA GACAATGGCG AAGAAATCGT CCGTTTCGCC GATGACAGCG AACCTTTCTC CGCGCTCGCG TTTAAAATCG CGACGGATCC GTTTGTCGGA CAGCTCACTT TTTTTCGGGT GTACTCCGGG GTGCTCACCG CGGGCTCTAC GGTCCTCAAC CCGGGGCGTA ACCAGAAGGA GCGTATCGGG CGCGTGTTGC AGATGCACGC CAATGAACGG CATGAAATCA AAGAGGTGCT TGCTGGCGAT ATCGCCGCCG CCGTCGGACT CAAAACAGCT TATACGGGAG ATACGCTCTG TGACTTGAAT AAGCCTATTG CTCTGGAGCA GATGGAGTTT CCCGAGCCGG TGATTCATGT CGCGGTCGAA CCAAAGACCA AGGCGGACCA GGAAAAGATG GGCATTGCTC TGGGGAAGCT TGCGCAGGAG GATCCGTCGT TTCGGGTCCG TACCGATCAG GAATCCGGGC AGACCATCAT CTCCGGTATG GGCGAGTTGC ATCTGGAAAT CATTGTCGAC CGCATGAAGC GTGAGTTCGG CGTCGAAGCT ACTGTGGGTG CGCCGCAGGT GGCGTATCGC GAAACGATCC GCAAGACTGT CGAGTCGGAA GGCAAGTTTG TTCGCCAGTC AGGCGGTCGT GGCCAATATG GACACGTCTG GTTGCGCCTT GAACCCCTCG AGCCGGGAAG CGGTTTTGTT TTCGAGAACG GGGTGGTCGG CGGTACGGTA CCCAAGGAGT TTATCAACCC TACTGAAAAG GGTGTTGAAG AAGCGCTGGA AAATGGTATC ATTGCCGGCT TCCCAGTGGT GGACGTCAAG GTCACCATTT TTGACGGTTC ATATCATGAT GTCGACTCCT CGGAGGCGGC ATTCAAGATC GCGGGGTCGA TGGGTTTCAA GGCGGGTGCG GCCAAGGCGA ACCCTGTACT GCTGGAACCC ATCTTTGCCG TAGAGGTAGT AACTCCGGAA GAATATATGG GTGACATCAT CGGCGACATC AACAGCCGTC GCGGCATGAT GCAGGGTATG GAAGACGAAG CGGGCGCCAA GCTGATCCGC TGCGAAGTAC CCCTGGCGGA GATGTTCGGA TATGCGACGA CGGTACGTTC GCTTTCCCAG GGTCGGGCCA CCTATACCAT GCAGTTCGAG AAGTATATGG AAGTCCCCGG CCATGTGGCC GAGGCCATTG TCAAGAAAAG TCAGCGCTAG
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Protein sequence | MARTTPIERY RNIGIMAHID AGKTTTTERI LFYTGVSHKI GEVHEGTAVM DWMAQEQERG ITITSAATTC FWKGMDGQRA EHRINIIDTP GHVDFTIEVE RSLRVLDGAM AVFCAVGGVQ PQSETVWRQA NKYKVPRIAF VNKMDRQGAN FKRVVDQIAT KLRGNPVPVQ LPIGEEDHFS GVIDLMKMKS INWDDALQGT RFTEEDIPPA LQADAEAARH FMVEAIADAD EDVMMKYLEG EEISIAELQA ALRKATISGA VVPVLCGSAF KNKGVQAALD AVLDYLPSPV DIKPVEGTNP DNGEEIVRFA DDSEPFSALA FKIATDPFVG QLTFFRVYSG VLTAGSTVLN PGRNQKERIG RVLQMHANER HEIKEVLAGD IAAAVGLKTA YTGDTLCDLN KPIALEQMEF PEPVIHVAVE PKTKADQEKM GIALGKLAQE DPSFRVRTDQ ESGQTIISGM GELHLEIIVD RMKREFGVEA TVGAPQVAYR ETIRKTVESE GKFVRQSGGR GQYGHVWLRL EPLEPGSGFV FENGVVGGTV PKEFINPTEK GVEEALENGI IAGFPVVDVK VTIFDGSYHD VDSSEAAFKI AGSMGFKAGA AKANPVLLEP IFAVEVVTPE EYMGDIIGDI NSRRGMMQGM EDEAGAKLIR CEVPLAEMFG YATTVRSLSQ GRATYTMQFE KYMEVPGHVA EAIVKKSQR
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