| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2019 |
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| Symbol | |
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| ID | 6160703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2190970 |
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| End bp | 2193567 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664788 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_001791051 |
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| Protein GI | 171058702 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.82296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ACAAGCTCAC GACTGCTTTC CAACAAGCCC TGGCCGACGC GCAGAGCTTG
GCCATCAACC GCGACAACCC CTACATCGAA CCGGCCCACC TGTTGGCGGC GATGCTGGCG
ATGCAGGACG GCCCGAAGGC CTTGCTCGAC CGCGCCGGCG CCAACACCGC GGCGCTGAAA
ACCGCGATGG ACACGCTGAT CAGGGGCCTG CCGCAGGTCG AGGGCAGCGG TCAGTCGGTG
CAGCCGGGCC GTGATCTGCT CGCGCTGCTG CAGGCGGCTG AAAAGGATGC CGGCAAGCGC
GGCGACCAGT TCGTCAGCAG CGAGCTGTTC CTGCTGGCGG TGGCCGACAG CAAGAGCGAC
ATCGGCGGCG TGGTGCGTGG TCACGGCCTG ACGCGCAAGG CGCTCGAGGC CGCGATCGAC
GCGGTGCGCG GTGGCGCCAC GGTCGACAAC GCCGAGGCCG AAGGCCAGCG CGAGGCGCTC
AAGAAATACA CGCTCGACCT GACCGAGCGC GCCCGCATGG GCAAGCTCGA CCCGGTGATC
GGCCGCGACG ACGAGATCCG CCGCGCCATC CAGGTGCTGC AGCGCCGCAG CAAGAACAAC
CCGGTGCTGA TCGGCGAGCC GGGTGTCGGC AAGACCGCGA TCGTCGAGGG CCTGGCGCAG
CGCATCGTCA ACGGCGAGGT GCCCGAGAGC CTGAAGAACA AGCGCGTGCT GGTGCTCGAC
ATGGCCGGGC TGCTGGCCGG CGCCAAGTAC CGCGGCGAGT TCGAGGAGCG CCTGAAGGCG
GTGCTCAAGG AAGTGGCCGC CGACGAGGGC CGCATCATCC TGTTCATCGA CGAGCTGCAC
ACGATGGTCG GCGCCGGCAA GGCCGAGGGC GCGATCGACG CCGGCAACAT GCTCAAGCCC
GCGCTGGCGC GTGGCGAGCT GCACTGCATC GGCGCGACCA CGCTCAACGA ATACCGCAAG
TACGTCGAGA AGGACGCCGC GCTGGAGCGG CGTTTCCAGA AGGTGCTGGT CGACGAACCG
AGCGTGGAGG CCACGGTCGC CATCCTGCGC GGCCTGCAGG AAAAGTACGA GGTGCACCAC
GGCGTGCAGA TCACCGACCC GGCCATCATC GCCGCGGCCG AGCTGAGCCA CCGCTACGTC
ACCGACCGCT TCCTGCCCGA CAAGGCGATC GACCTGATCG ACGAGGCGGC GGCCAAGATC
AAGATCGAGA TGGACTCCAA GCCGGAGTCG ATGGACAAGC TCGATCGCCG GCTGATCCAG
CTCAAGATCG AGCGCGAGGC GGTGCGCAAG GAGAAGGACG AAGGTTCGGT GCGCCGCTTC
GGCCTGATCG AGGAAGAGAT CGCCAAGCTC GAACGCGAAG CGGCCGATCT GGAGGAGATC
TGGAAGGCTG AAAAGGCCGC CGCGCAGGGT TCCAAGCAGT TCATGGAAGA GATCGAGAGC
GCGCGCCTGC AGATCGAGGA GTTCAAGCGC AAGGGCGATT TCAACCGCGT GGCCGAGTTG
CAGTACGGCA AGCTGCCCGA GCTGGAAAAG AAGCTGCACG ACGCCCAGGC CAAGGAGGCC
GGCAAGGCCA AGGGCGGTCA GGGCCCGCAA CTGCTGCGCA CGGTGGTGGG CGCCGAGGAG
ATCGCCGAGG TGGTGTCGCG TGCCACCGGC ATCCCGGTGG CCAAGCTGAT GCAGGGCGAG
CGCGACAAGC TGCTGCAGAT GGAAGGCAAG CTGCACGACC GCGTGGTCGG CCAGAGCGAG
GCGATCATCG CGGTGAGCAA CGCGATCCGG CGTTCACGCG CCGGCTTGAG CGACCCGAAC
CGGCCGCTCG GCAGCTTCCT GTTCCTGGGG CCCACCGGCG TCGGCAAGAC CGAGCTGTGC
AAGGCGCTGG CGGGTTTCCT GTTCGACAGC GACGACCACA TGATCCGCAT CGACATGAGC
GAGTTCATGG AGAAGCACTC GGTGAGCCGG CTGATCGGCG CGCCCCCGGG TTACGTCGGT
TATGACGAAG GCGGCTACCT GACCGAGGCG GTGCGCCGCA AGCCTTACAG CGTGCTGCTG
CTCGACGAGG TCGAGAAGGC GCATCCGGAC GTCTTCAACG TGCTGCTGCA GGTGCTCGAC
GACGGCCGCC TGACCGACGG GCAGGGCCGC ACGGTCGACT TCAAGAACAC CGTGATCGTG
ATGACCAGCA ACCTGGGCTC GCACCAGATC ATGCAGATGG CCGGGCAGGA CACCGAGCTG
ATCCGCGAGG CGGTGTGGGC CGAGGTCAAG CAGCATTTCC GCCCGGAGTT CCTGAACCGC
ATCGACGAGG CGGTGGTGTT CCATGCGCTC GACCAGAAGC ACATCGAGGC GATCGCGCAG
ATCCAGCTGA AGGCGCTGGC GGCGCGGCTG GGCAAGATGG AGATGACGCT GGAGGTCTCG
CCCGAGGCGC TGGCCGAGCT GGCGAAGGTC GGCTTCGATC CGGTGTTCGG CGCGCGGCCG
CTCAAGCGGG CGATCCAGCA GCGCATCGAG AACCCGGTCG CCAAGCTGAT CCTGGAGGGC
CGCTTCGGCC CGAAGGACGT GGTGCCGGTC AACGTCGGCG CCACCGGCGA CTTCGAGTTC
GGCCGCACGG TGCACTGA
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| Protein sequence | MRLDKLTTAF QQALADAQSL AINRDNPYIE PAHLLAAMLA MQDGPKALLD RAGANTAALK
TAMDTLIRGL PQVEGSGQSV QPGRDLLALL QAAEKDAGKR GDQFVSSELF LLAVADSKSD
IGGVVRGHGL TRKALEAAID AVRGGATVDN AEAEGQREAL KKYTLDLTER ARMGKLDPVI
GRDDEIRRAI QVLQRRSKNN PVLIGEPGVG KTAIVEGLAQ RIVNGEVPES LKNKRVLVLD
MAGLLAGAKY RGEFEERLKA VLKEVAADEG RIILFIDELH TMVGAGKAEG AIDAGNMLKP
ALARGELHCI GATTLNEYRK YVEKDAALER RFQKVLVDEP SVEATVAILR GLQEKYEVHH
GVQITDPAII AAAELSHRYV TDRFLPDKAI DLIDEAAAKI KIEMDSKPES MDKLDRRLIQ
LKIEREAVRK EKDEGSVRRF GLIEEEIAKL EREAADLEEI WKAEKAAAQG SKQFMEEIES
ARLQIEEFKR KGDFNRVAEL QYGKLPELEK KLHDAQAKEA GKAKGGQGPQ LLRTVVGAEE
IAEVVSRATG IPVAKLMQGE RDKLLQMEGK LHDRVVGQSE AIIAVSNAIR RSRAGLSDPN
RPLGSFLFLG PTGVGKTELC KALAGFLFDS DDHMIRIDMS EFMEKHSVSR LIGAPPGYVG
YDEGGYLTEA VRRKPYSVLL LDEVEKAHPD VFNVLLQVLD DGRLTDGQGR TVDFKNTVIV
MTSNLGSHQI MQMAGQDTEL IREAVWAEVK QHFRPEFLNR IDEAVVFHAL DQKHIEAIAQ
IQLKALAARL GKMEMTLEVS PEALAELAKV GFDPVFGARP LKRAIQQRIE NPVAKLILEG
RFGPKDVVPV NVGATGDFEF GRTVH
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