| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0047 |
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| Symbol | |
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| ID | 6159819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 51409 |
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| End bp | 52935 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662791 |
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| Product | histidine kinase |
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| Protein accession | YP_001789087 |
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| Protein GI | 171056738 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGC CGCTGCTGCC GGGCCTGCCG CGTGCGGTCG CGCGGCTGCC GCTGTCGATC
CGCAGCAAGC TGTCGGGCGT GCTGCTGGCG ATCGTCGGGC TGCTGATCGC GATCGGCAGC
GTCGGCCTCT ACGAGCTCGG CGAGGTCAAT GCGCGCACCG AGGATCTGGT GCGGCTGCAG
CGCAAGGTGG CGGCATTCCG GCAGATCCAG CAGGACACGA TGGGCCAGTT GCACAACGTC
GCCAACGTGA TGCTGGCGCC CGACGAGCGC ACGCTGGAGA CCACGCTGCG CCAGCTCAGC
CAGTTCGGCT ACGACCTCGA CCGGCTGCAG TTCGTCTCCA CCGACGAAGC CGAGCTGTAC
GCCCGGGTGC GGCACGACTA CGACGCCTTC ATCGGCGAGG TCGGCGCTGT CATCGCCCTG
GTGCGGAGCG GCCGGCTGGC CGAGGCCCGC GAGGCCCAGG CCCGCCGGGC CGTGCCGCTG
GCCGAGCGGC TTGAGCGCAT GACCAACGAG CTGGTGAACC GCGCCGAGGC CGACATGCTG
GCGCAGGTGG ATGCGGGCGC CGCCGGTTAC GCCCGCTCGC GCGCGCTGGT GCTGTCGATC
GCTGCGGGGA GCGTGGTGCT GGCGTTGCTG CTCGGCTATG CGCTGTCGTG GTCGCTGGTC
GAGCCGGTGC GGGAGATGGA TGCCCGACTC GCCGAGATCG CCGCCGGCCA GTTCGAGCGG
CGCATCGACA TCCCCAACCG CGACGAACTC GGCGCGCTCG CAGCCGACCT GAATCGCATG
AGCGCCGAAC TAGGCCGGCT GGTGCGCGAG GTCGAGGCGG CCAACCGCAA CAAGTCGGCC
TTCCTCGCCA ACATGAGCCA CGAGCTGCGC ACGCCGCTGA ACGCGATCAT CGGTTTCTCC
GAGGTGCTGA TCGAGCAGAT GTTCGGCGAG GTCAACGCCA AGCAGCTCGA ATACCTGCGC
GACATCCATG CCTCGGGCCA CCACCTGCTC ACGCTGATCA ACGACGTGCT CGACCTGTCG
AAGATCGAGG CCGGCCGCAT GGAGCTGCAG CCGAGCCGCT TCCACCTGCC CGAGCTGCTG
GACAACTCGC TGACGCTGGT GCGCGAGCGC GCCGCCAACC ACGGCCTGCG GCTCACGCTC
GATGTGCAGG ACGGCCTGGG CGACTGGGTC GCCGACCCGC GCAAGATCAA GCAGGTGGTG
GTCAATCTGC TGTCGAATGC CGTGAAGTTC ACGCCGGCCG GCGGCCACGT CACGCTGCGT
GCAAGGCGCA TCGATGCCGG CACGGCCGAG ATCGCCGTGA TCGACACCGG CGTGGGCATC
GCGCCCGAGG AGCAGGCACA GGTGTTCGAG GAGTTCCGCC AGGCCGGCAC CGACCCCTTG
CGCAAGTCCG AGGGCACCGG CCTGGGCCTG GCGCTGGCGC GCCGCTTCGT CGAACTGCAC
GGCGGCACGC TGCGCGTCGA CAGCGCGCCC GGCCGCGGCT CGACCTTTGC CTTCACCCTG
CCCGATCGCA CCCTGGAGCC GACATGA
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| Protein sequence | MTSPLLPGLP RAVARLPLSI RSKLSGVLLA IVGLLIAIGS VGLYELGEVN ARTEDLVRLQ
RKVAAFRQIQ QDTMGQLHNV ANVMLAPDER TLETTLRQLS QFGYDLDRLQ FVSTDEAELY
ARVRHDYDAF IGEVGAVIAL VRSGRLAEAR EAQARRAVPL AERLERMTNE LVNRAEADML
AQVDAGAAGY ARSRALVLSI AAGSVVLALL LGYALSWSLV EPVREMDARL AEIAAGQFER
RIDIPNRDEL GALAADLNRM SAELGRLVRE VEAANRNKSA FLANMSHELR TPLNAIIGFS
EVLIEQMFGE VNAKQLEYLR DIHASGHHLL TLINDVLDLS KIEAGRMELQ PSRFHLPELL
DNSLTLVRER AANHGLRLTL DVQDGLGDWV ADPRKIKQVV VNLLSNAVKF TPAGGHVTLR
ARRIDAGTAE IAVIDTGVGI APEEQAQVFE EFRQAGTDPL RKSEGTGLGL ALARRFVELH
GGTLRVDSAP GRGSTFAFTL PDRTLEPT
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