Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1213 |
Symbol | |
ID | 4422978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1209907 |
End bp | 1211967 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639674910 |
Product | membrane carboxypeptidase (penicillin-binding protein) |
Protein accession | YP_818684 |
Protein GI | 116618313 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0924333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTGGT TGAAAGCAAT AAGTCAAAAA GTGTGGGATA AGTTAGGACC AATTTGGCAT CGTTGGCAAT TTGGTCGCTT GCTGATTATT TTATTTTTAA CATTATTTTT GGTCACAAGT GCCTACTTAG CAATTTTAGC TAAAACTGCA CACGTTAAAA ATTTAGAAGC AACGCTCTCT CAAACGGCAA CAGTTTACGA TGATCAGGGT GAAAAAGCAG GCGAATTATA TTCACAAAAA GGCACCTATG TCTCGTATAA TAAGATTTCA CAGAACATGC GAGATGCAGT TTTATCAATC GAAGACCGTA ATTTTTATCA TGAGTATGGC TTCTCGGTAA AAGGGATTGC ACGTGCAGCT GTTTTATTGG TTAAAAACAA AATAACCGGA TCTAATACTA TTTCTGGTGG CGGTTCTACG TTAACACAGC AATTGGTTAA AAATGCTTAT TTGTCGCAAG AACAGACATT TACCAGAAAA GCCAAAGAAA TCTTTTTGTC CATGCAGGTT GAACAAGATT ACACTAAAAA TGAAATTTTT ACGATGTACC TTAATAATGC ATGGTTTGGT CATGGTGTCT GGGGCGTAGA AGATGCATCA CAGAAATATT TTGGTGTTCA TGCTAGTGAA TTAACGACAA CACAAGCGGC TACACTAGCG GGTATGTTAA CTAGTCCCGC CAAATTTAAT CCTATTGATT ATCCAGAAGC TTCCAAGGCT CGACGTAATT TAGTTTTGAC AACCATGGTT GAGAATAAAA AGATCACTTC AGCGCAGGCT AGTGCAGCCA AATCGACGAC GGATACGCTA AATGATACTT ATGATGATTC TGGTGATTAT AATTATCCTT GGTATTTCGA TTCAGTGATT AACGAAGCCA TTAATACCTA TGGTTTAACA GAAAACGATG TTATGAATCG TGGGTATAAA ATATACACAA CGTTAAACCA AAAGGATCAA ACGAATTTAC AAAATGATTT CGATAATTCA GCATTATTTA ACTATGTTGA TGACGCACAA GCAGCATCTA TTGTTTTGAA TGCTAAAACT GGTGGGGTAT TGGCTGTAGT TGGTGGTCGT GAAACATCTC ATACTTTCCG TGGCTTTAAT CGTGCTAATC AATCACAATT ACAACCTGGT TCAGCAATCA AACCAATGGT CGTTTATGCA CCAGCTCTAC AACGAGGTTA TAGTATTAGT ACAAAATTGC CTAACCAATC GATGAGTTTT GGGACGAACA ATTATACACC AAACAATGCC ATGAACGTTG AAACGGCTGA TGTTCCTATG TATTCAGCTT TGGAACATTC GTATAATATT CCGGCAGTTT ATTTACTTAA TAAAATGGGT GTAGAGGTTG GTTATAAGAG TGGTACTAAG TTTGGCTTAC CATTAACCAA AAAGGATAAG AACCTATCAC TAGCACTAGG CGGATTGACC AAAGGTGTAT CCCCACAACA AATGGCACAA GCATACACAG CTTTTGCCAA TGGTGGTGTG ATGAGTCAGG CACATTATAT TACTAAAATA GTTGATGCGA GTGGCAAAGT AATTGTTAGC TCACCAAAGG CAAAACAAAC ACAGGTCATC AGTAGTAAGG TTGCAAATAA TATGACACGT ATGATGCTAG GTACCTATAC GGATGGTACA GGTGTTGGAT CTGCACCATC CGGTTACACT ATTGCTGGTA AAACTGGTAC TACTGAAAAT CCTAATAGTA CCAATAATGC TAGTTCGTCA AAGGATTCAT GGGCAATGGC GTATACGAAA GACATTGTTC AAGCAACTTG GATGGGACTG GAAGGGAACA ATACTGGTTC TTTGCCGTTA GGATTAACGT CTACAATGGG ACCACTGGTT AAAACGTCTT TGGAACAAAT TTTGCCAAAT ACGGATCAAA CCGCCTTTAC AGTAACAAAT CCTAACACTA CATCAAGTAG TACAAGTCAA AGTAGTGACT TATGGGGAAC GATTCAAGAT GATTTCAATA GTGGCGTTGA CAAAGCTGTT GAAGGAGCGG GTCAATTGTG GAATAATGTC AAAGGATTAT TTGGTAATTA A
|
Protein sequence | MKWLKAISQK VWDKLGPIWH RWQFGRLLII LFLTLFLVTS AYLAILAKTA HVKNLEATLS QTATVYDDQG EKAGELYSQK GTYVSYNKIS QNMRDAVLSI EDRNFYHEYG FSVKGIARAA VLLVKNKITG SNTISGGGST LTQQLVKNAY LSQEQTFTRK AKEIFLSMQV EQDYTKNEIF TMYLNNAWFG HGVWGVEDAS QKYFGVHASE LTTTQAATLA GMLTSPAKFN PIDYPEASKA RRNLVLTTMV ENKKITSAQA SAAKSTTDTL NDTYDDSGDY NYPWYFDSVI NEAINTYGLT ENDVMNRGYK IYTTLNQKDQ TNLQNDFDNS ALFNYVDDAQ AASIVLNAKT GGVLAVVGGR ETSHTFRGFN RANQSQLQPG SAIKPMVVYA PALQRGYSIS TKLPNQSMSF GTNNYTPNNA MNVETADVPM YSALEHSYNI PAVYLLNKMG VEVGYKSGTK FGLPLTKKDK NLSLALGGLT KGVSPQQMAQ AYTAFANGGV MSQAHYITKI VDASGKVIVS SPKAKQTQVI SSKVANNMTR MMLGTYTDGT GVGSAPSGYT IAGKTGTTEN PNSTNNASSS KDSWAMAYTK DIVQATWMGL EGNNTGSLPL GLTSTMGPLV KTSLEQILPN TDQTAFTVTN PNTTSSSTSQ SSDLWGTIQD DFNSGVDKAV EGAGQLWNNV KGLFGN
|
| |