Gene Ksed_16030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16030 
Symbol 
ID8373109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1648287 
End bp1649510 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content74% 
IMG OID644991871 
ProductDNA repair nucleotidyltransferase/DNA polymerase 
Protein accessionYP_003149383 
Protein GI256825423 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.218569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0704551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCG TGGCAGCCCG GGAGCAGACC GCCGTCCTGC ACGTGGACAT GGACGCCTTC 
TACGCGTCGG TGGCCCTGGT GGACCGCCCG GAACTGCGCG GTCAGCCGGT CATCGTCGGT
GGGGGCCACC GGTCGGTGGT GCTCTCGGCC ACTTACGAGG CACGCGCTTT CGGGGTGCGC
TCGGCGATGC CGATGGCTCG CGCCCGACGC CTGTGCCCCC AGGCCACCGT GGTGCGGCCG
GACCACGAGC GCTACGCCGC GGTCTCGGCT GCCGTGATGG AGATCTTCCG ACAGGTGACC
CACGCCGTGC AGCCGACCTC CGTGGACGAG GCCTTCCTGG ACGTCACCGG CACCTCCCGC
CGGTGGGGGA GCCCGCTGCA GGTGGCCGAG TGGATCCGGC GGACCGTGGC CGCCGAGCAG
CACATCACCT GCTCGGTGGG CATCGGCCCC AACCCATTCG TCGCCAAGGT CGCCTCGGGG
CAGGCCAAGC CGGACGGCAC CCGCCAGGTC ACCCCGGCCG AGGTGGTGTC CTTCCTGCAC
CCCCTGGACG TGGGCGTCCT GTGGGGGGTG GGGGAGAAGA CCCAGGAGCA GCTGGCCCGG
TTCGGGCTGA CCACTGTCGC CCAGGTGGCC CACACCCCGG TGGTCACCCT GCAACGCATC
GTGGGCGACC ACGCCGGGGC GGCGCTCGCG GAGCGGGCGT GGGGTCGCGA CCCACAGCGG
GTCCGGCCCG TGGTGGCCGA GAAGACCATC GGCAACGGGC AGACCTTCGA CCACGACATC
GACGACCCCC GCCAGGTGGA GACCCGGCTG CTGCTGCTCT CCGACCGGGT GGCCGCCCGG
GCCCGCACGG CAGGGGTCAT GGGGCGCACC GTACAGGTGA CGGTGCGGTT CGCCGACTTC
ACCACCGTCC AGCGGTCCCG CACCCTGCAG CGCCCCAGCG ACGTGAGCCG GGAGATCCAC
CAGGTGGCAC GGGAGGTCTT CGCCTCCCTG GGCCTGCAGC GGGCCCGGGT GCGGATGGTG
CGGGTCACCC TCTCGGGCCT GACGCCCACC GACCGGACCC CGCGGCAGGG CATGCTGGAC
GAGCCGGAGG TGGGGTGGCG GGAGGCTGAT GCGGCCGTGG ACCGGGCCAG CGCACGGTTC
GGTGCCGGCA TCGTCCGGCC GGCCAGCCTG CTGCCGGAGG AGCGGGGCCC CCGTGGCCGG
GCCGGGTCGG GGGCGCATGC GTAG
 
Protein sequence
MVSVAAREQT AVLHVDMDAF YASVALVDRP ELRGQPVIVG GGHRSVVLSA TYEARAFGVR 
SAMPMARARR LCPQATVVRP DHERYAAVSA AVMEIFRQVT HAVQPTSVDE AFLDVTGTSR
RWGSPLQVAE WIRRTVAAEQ HITCSVGIGP NPFVAKVASG QAKPDGTRQV TPAEVVSFLH
PLDVGVLWGV GEKTQEQLAR FGLTTVAQVA HTPVVTLQRI VGDHAGAALA ERAWGRDPQR
VRPVVAEKTI GNGQTFDHDI DDPRQVETRL LLLSDRVAAR ARTAGVMGRT VQVTVRFADF
TTVQRSRTLQ RPSDVSREIH QVAREVFASL GLQRARVRMV RVTLSGLTPT DRTPRQGMLD
EPEVGWREAD AAVDRASARF GAGIVRPASL LPEERGPRGR AGSGAHA