| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_14790 |
|---|
| Symbol | |
|---|
| ID | 8372987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1518580 |
|---|
| End bp | 1519974 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644991751 |
|---|
| Product | Major Facilitator Superfamily transporter |
|---|
| Protein accession | YP_003149269 |
|---|
| Protein GI | 256825309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.13794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCC AGTCGTCCGC TCCGGCACCC CGCACCGGGC TGCCCCGCTT CCTGGCGCCC
TTCGCCACCC CCGACTACCG ACTGCTCGCC GCGAGCCTGC TGCTGGTGTC CTTCGCCACC
GGTGTCTGGA CCGTGGGCCT GGTCTACGCG GTCAAGGGCC TGGGCGGGAC GGAGCTGGAC
CTCTCGGCGG TCACGGCGGT CGGCGCGGTG GGCCTCATCG TGTTCGCCCT GCTCGGGGGA
GTGGCGGCCG ACCGGTTGCC CCTGCGCGGG CTGCTGGTGG CCTGCTCCAG CGTCCTGGCC
CTCGTGGGGG CGGTGGTGGC CGCCCTGGGG GCCACCGGGA CCCTGCAGGT GTGGCAGCTC
ATGGTGGCCG CATTCGTGGC CATGTCCGCG GCCGGTATCT ACAACCCCGC CTACTCGGCC
CTGCTGCCCC GCGTGCTGCA CGACGACCAG CTGCTGGCCG CCAACGGGGT GGAGGCCGCG
AGCCGACCCG TGCTGCAGCA GGCGCTGGGC CCGGCCGCGG CCGGCTTCCT GGTGGGTGCG
TTGGCACCGC CGGCGGCGAT GGCCGTCATG GCCCTCTCCC AGGGGCTGGC GGTGCTGTGC
GTGCTGGCCA TGCGCACCGG CGGGCTGACC CGCCGCGCGC TGCCCGTGGA GGAGGGGCGT
GAGCCGCAGA CCCTGTGGCA GGACTTCACC GAGGGGGCCG CCTACACCTG GCGGACCCCG
TGGCTCGCGG CCACCCTGGT GTGGTCGGTC GTGGCCGTGT TCCTCTTCAT CGGCCCGATG
GAGGTGCTGC TGCCCTTCAT CGTCACCGAG CACGGTGGCG GCCCGGACAC CTTCGGCCTG
CTGCTCGCCT GCCTGGGCGT GGGTGCGGCG GTCGGGGCGA TCGGCATCAG CTCCCGCCGT
CTGCCGCGGC ACTACCTCAC GGTGATGATC ACGGTGTGGT CGGTGGCCGC CATCCCCTTC
TTCCTGCTGG CCGTGACCGA CGACTTCTGG CTGATGGGTC TGGTGCTCTT CGTGTTCGGC
GTCGGCGACG GGGTGGGCAT GGTCATCTGG GGCACCCTGC TGCAGCGCCG GGTGCCGCGC
TCGATGCTGG GGCGCGTCAG TTCGCTGGAC TTCTTCGTGT CGCTGGCGAT GATGCCGGTC
TCGATGGCCG TGGCGGGCCC GGTGGCCCAG GTGCTGCCGC TGTGGGTCAT CTTCGCGCTG
CCGTCCATCG GCATCCCGCT GCTGGGCATC ATCTGCTACG TGCTGGCCGA CCTGCACGGC
GACGAGCTGC GCCACCCCCT GGACACGCCG GTGGACCTGG CCGACTCCCA CGCCGAGGTG
GTCGACGGCA TCTCAGGGCT GCACGCCCAC CCCGTCGTGC GCACCGACGA CCTCCCGGTC
CGGAGCACCG ACTGA
|
|---|
| Protein sequence | MTAQSSAPAP RTGLPRFLAP FATPDYRLLA ASLLLVSFAT GVWTVGLVYA VKGLGGTELD
LSAVTAVGAV GLIVFALLGG VAADRLPLRG LLVACSSVLA LVGAVVAALG ATGTLQVWQL
MVAAFVAMSA AGIYNPAYSA LLPRVLHDDQ LLAANGVEAA SRPVLQQALG PAAAGFLVGA
LAPPAAMAVM ALSQGLAVLC VLAMRTGGLT RRALPVEEGR EPQTLWQDFT EGAAYTWRTP
WLAATLVWSV VAVFLFIGPM EVLLPFIVTE HGGGPDTFGL LLACLGVGAA VGAIGISSRR
LPRHYLTVMI TVWSVAAIPF FLLAVTDDFW LMGLVLFVFG VGDGVGMVIW GTLLQRRVPR
SMLGRVSSLD FFVSLAMMPV SMAVAGPVAQ VLPLWVIFAL PSIGIPLLGI ICYVLADLHG
DELRHPLDTP VDLADSHAEV VDGISGLHAH PVVRTDDLPV RSTD
|
|---|
| |