| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00600 |
|---|
| Symbol | |
|---|
| ID | 8371573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 63102 |
|---|
| End bp | 64601 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644990376 |
|---|
| Product | MFS transporter, sugar porter family |
|---|
| Protein accession | YP_003147922 |
|---|
| Protein GI | 256823962 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG CAGCCCACGC CGCGGACGGC GCACGTGACG GGAACCCCAC GGGGAACGAG
CCCGCGGAGA AGGACGCCCT GACCGGCAAG GTCGTGATGC TGTCGATGGT CGCCGCCCTG
GGTGGCTTCC TCTTCGGCTT CGACTCCTCG GTCATCAACG GCGGCGTCAA CGCCATCCAG
GAGGAGTTCG GTCTGTCCGA TGTCCTCATC GGCTTCGTCG TCTCCTGCGC CCTGCTCGGC
GCGATGGTGG GTGCCTGGTT CGCCGGCACC TTCGCCGACA AGGTGGGACG CACCCGGGCG
ATGGTGGTGG CGTCCGTGCT GTTCACCGCA TCGGCCATCG GGTCCGCCCT GTGCTTCGGC
CCGTGGGACC TCATCTTCTG GCGCTTCGTC GGGGGCGCCG GCGTGGGCAT GGCCTCGGTG
CTGGCCCCGG CCTACATCGC CGAGATCTCG CCGGCGGCCG TGCGTGGCCG CCTGGGCTCC
CTGCAGCAGC TCGCCATCGT GATCGGCATC TTCATCGCCC TGCTCGTGGA CGCCTACCTG
GCCGACGCCG CGGGCGGCGC CGCCGAGGTG CTGTGGATGG ACCGTGAGGC GTGGCGCTGG
ATGTTCGCCT CCGAGCTCGT CCCGGCCGTG CTCTACGGCG CCCTGGCGCT GAGCATCCCT
GAGTCGCCGC GCTACCTGGT GAACACCGGT GACCTGAAGA AGGCCGGCGA GGTGCTGCGC
GACGTCGTGG GCATTCGCGG CAAGGGTGCG GCGCAGCGCA AGATCGAGGA GATCCGCCGC
TCGTTGTACC GGGAGCGCAA GCAGTCGCTC GCGGACCTGA AGGGTGCCGC CGCCGGCCTC
AAGCCCATCG TCTGGGCGGG CATCCTGCTG AGCGTCTTCC AGCAGTTCGT CGGCATCAAC
GTCATCTTCT ACTACGGCTC CACCCTGTGG CAGGCCGTCG GCTTCGAGGA GTCCCAGTCC
CTCATGATCA ACGTCATCAC CTCGATCACG AACATCGTGG TGACCATCGT GGCCATCCTG
CTCGTGGACA AGATCGGCCG TCGCCGGCTC CTGCTGTGGG GTTCGGCGGG CATGGCCCTG
TCGCTGGGCA CCATGGCCGT GGCCTTCTCC CAGGCCGTCA CCGAGGGGTC CGGCCCGGAC
CAGTCGGTCA GTCTTCCCGA GCCCTGGGGC GTCATCGCCC TGGTGGCCGC CAACGCCTTC
GTGGTCTCCT TCGGCGCCAC CTGGGGCCCG ATGGTGTGGG TGCTGCTGGG CGAGATGTTC
CCCAACAGCA TCCGCGGCAT GGCCCTGGGC GTGGCCGCGG CCGCGCAGTG GTTGGCGAAC
TTCGTCATCA CCACCACCTT CCCCTGGCTC GCGAGCACCT CGCTGGTGCT CGCCTACGGC
CTGTACGCGG CCTTCGCGGC CCTGTCCTTC CTGTTCGTGT TCAAGGTGAT CGAGGAGACC
AAGGGCAAGG AGCTCGAGGA GATGGGCGAG GAGACCCCCG TCACCCAGCC CGCCACGTAA
|
|---|
| Protein sequence | MSTAAHAADG ARDGNPTGNE PAEKDALTGK VVMLSMVAAL GGFLFGFDSS VINGGVNAIQ
EEFGLSDVLI GFVVSCALLG AMVGAWFAGT FADKVGRTRA MVVASVLFTA SAIGSALCFG
PWDLIFWRFV GGAGVGMASV LAPAYIAEIS PAAVRGRLGS LQQLAIVIGI FIALLVDAYL
ADAAGGAAEV LWMDREAWRW MFASELVPAV LYGALALSIP ESPRYLVNTG DLKKAGEVLR
DVVGIRGKGA AQRKIEEIRR SLYRERKQSL ADLKGAAAGL KPIVWAGILL SVFQQFVGIN
VIFYYGSTLW QAVGFEESQS LMINVITSIT NIVVTIVAIL LVDKIGRRRL LLWGSAGMAL
SLGTMAVAFS QAVTEGSGPD QSVSLPEPWG VIALVAANAF VVSFGATWGP MVWVLLGEMF
PNSIRGMALG VAAAAQWLAN FVITTTFPWL ASTSLVLAYG LYAAFAALSF LFVFKVIEET
KGKELEEMGE ETPVTQPAT
|
|---|
| |