Gene Ksed_00300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00300 
Symbol 
ID8371543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp32599 
End bp33540 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content73% 
IMG OID644990346 
Producthypothetical protein 
Protein accessionYP_003147892 
Protein GI256823932 
COG category[B] Chromatin structure and dynamics
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG5406] Nucleosome binding factor SPN, SPT16 subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.466922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC GTCCTGCCGC CCGTACCCTG CTCGCCGTCG CCGCCGCCGC GACCTTGGGC 
CTCACCGCCT GTGGCGGTGA CGACTCCGAG GGTGAGGAGA GCACCTCCCA GTCCTCGAGC
GAGTCCTCCG AGGAGTCCGA GTCCAGCGAG GACGAGGAGT CCAGCGAGGA GACCGAGTCC
AGCGAGGGCG AGGAGAGCCC GTCCGAGGAG CCCACCTCGG AGGAGCCCAG CGAGTCCGCG
CCCGTGGAGA GCCCCTCCAC TGACGCCAGC GCCCCGGCCC TCGACCCGTC GGCCCCGCCC
GCCGACCCGA GCGCCCCCGT CGTCGACCCG TCGGCCCCCT CCACACCGGC CACCGACCCC
AGCGAGGGCA CCGGCCTCGA CCAGGCCCTC GCGGCCGAGC TCGAGCCGAT GGTGCTGACC
GCCGCCGCCG TGCCCGGTGG CACCGGCCAG GGCCAGACCC AGTTCATCCC CGAGGCCCAG
GGCCAGCCGC TGCACATGAC GCTCACGGGC CTGGAGGCCA CCGGCGCGTG CAAGACGGCC
GTGGACACCC TCAACAGCGG TGAGCGTCTG CCCTCCGGCA GCCAGTTCAC CATCACCCAG
CTCGCCTCCG GCGCCCAGGT GCAGGTCGGT GTCGTGAAGA TCGACGGCGC CGAGCAGGTC
GCCAAGGACG TCGCCGCCAT CTCCTCCGCC TGCAACACCA TCGAGGGCCC CGGCGGATCG
GCCTCCGTCA CCTCGCTGCC GAGCAACAAC GGCTACGTCA TGGGCCTGCA GAACGACGGC
CAGACCGCTG GTGGCTTCTC GATGGGCGTG GACGCCGTGG GTCCGGAGCA CGCCGCCGTG
GTCCTGGCCG TCTCGCAGCA GGGCGAGCTG AACGCCTCCG AGGTCGGCGC CGTCATGGAC
GCCCAGGTGC AGAAGGCCAC CTCGGCCGCC CCGCAGGGCT GA
 
Protein sequence
MTRRPAARTL LAVAAAATLG LTACGGDDSE GEESTSQSSS ESSEESESSE DEESSEETES 
SEGEESPSEE PTSEEPSESA PVESPSTDAS APALDPSAPP ADPSAPVVDP SAPSTPATDP
SEGTGLDQAL AAELEPMVLT AAAVPGGTGQ GQTQFIPEAQ GQPLHMTLTG LEATGACKTA
VDTLNSGERL PSGSQFTITQ LASGAQVQVG VVKIDGAEQV AKDVAAISSA CNTIEGPGGS
ASVTSLPSNN GYVMGLQNDG QTAGGFSMGV DAVGPEHAAV VLAVSQQGEL NASEVGAVMD
AQVQKATSAA PQG