Gene Ksed_00050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00050 
Symbol 
ID8371518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp5689 
End bp6279 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content74% 
IMG OID644990321 
Productpredicted RNA-binding protein containing Zn ribbon 
Protein accessionYP_003147870 
Protein GI256823910 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CCGCCCCGGG TCCGGGGGAT CGGCCGGGCG CTGGCAACCC CCATCAGGGC 
GACGCGCACC AGCAGCCGGT TGGCGGGGCC TCATCCGAGG AGGAACTGGA TGCCGCGGAC
CTGAGCCTCG CCCGGATGCG GGACATGGCT CGCTCGCGAG GGCTGCGCCC CGGCGCGCCG
GGGCGGCGTT CGCGGAAGCG ACCGGGCGGC CCGGCCGGCA CCTCCGGCAA GGGACGACGC
GATCCGCAGA CCCTGGGGGC GGAGTTCTCG CGGATGATCG ACGACCGTGG CTGGGGGGAC
GAGCTGAAGG TCGGGCGTGT GATGGGTGAC TGGGTCGGGA TCGTGGGCCC AGACGTCGCG
GCGCACAGCC TGCCGGAGTC CTTCGAGGAG GGCGTGTTGC TGGTGCGCGC GGAGTCCTCC
ACCTGGGCCA CGCAGCTGAC GATGTTGACC GCCACCCTGC AGAAGCGCCT GGATGACGAG
CTGGGCTTCG GGGTGGTGAC CTCGGTGCGG GTCGTGGGGC CGGCGGCGCC GAGCTGGAAG
CACGGCCGCC GGCGGGTCCA GGGGCAGGGT CCGCGCGACA CCTACGGGTG A
 
Protein sequence
MSAAAPGPGD RPGAGNPHQG DAHQQPVGGA SSEEELDAAD LSLARMRDMA RSRGLRPGAP 
GRRSRKRPGG PAGTSGKGRR DPQTLGAEFS RMIDDRGWGD ELKVGRVMGD WVGIVGPDVA
AHSLPESFEE GVLLVRAESS TWATQLTMLT ATLQKRLDDE LGFGVVTSVR VVGPAAPSWK
HGRRRVQGQG PRDTYG