Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0003 |
Symbol | |
ID | 5335797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 2315385 |
End bp | 2316299 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_001359759 |
Protein GI | 152963975 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0012708 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCACATCG GTCTCGTGGG TCTGGGCAAG ATGGGCGGGA ACATGCGTTC CCGCCTCCGC GACAAGGGCA TCGAGGTCAC CGGGTACGAC CCGAACCCCG ACGTCACCGA CGTCCCGTCC CTGGCTGCGC TGGTCGAGGC GCTGCCCTCG CCCAAGATCG TCTGGGTGAT GGTCCCCTCG GGCAAGATCA CCCGCGACAC CGTCGCGAAC CTGGCGCCGC TGCTCAAGGA CGGCGACCTG GTCATCGACG GCGGCAACTC CAAGTGGACC GACGACGAGA TCAACTCCAA GCTCCTCGCC GAGCGCGGCA CCGGCTACAT GGACTGCGGC GTCTCCGGCG GCGTGTGGGG CAAGGACAAC GGCTACGGCC TGATGGTCGG CGGCTCCAAG GGCCACGTCG ACCTGGCGAT GCCGATCTTC GACGCGCTGC GCCCGGAGGG CCCCCGCGAG GAGGGCTTCG TCCACGCCGG CGGCGTCGGG GCGGGCCACT ACTCGAAGAT GGTCCACAAC GGCATCGAGT ACGGCCTGAT GCACGCCTAC GCCGAGGGCT ACGAGCTGCT GGAGGCGAAG GGGATCATCC ACGACGTCCC CGCCGTCTTC AAGGCCTGGA CCCGCGGCAC GGTCGTCCGC TCCTGGCTGC TGGACCTCAT GGTCCGCGCC CTCGAGGAGG ACCCCAAGCT GGACAACATC CGCGGCTACG CGCAGGACTC CGGCGAGGGT CGCTGGACCC TGGAGCAGGC CATCGAGAAC GCGGTCCCCA TGCCCGTCCT CGCCGCGGCC CTCTTCGCCC GCTTCTCCTC CCGCCAGGAG GACTCCCCCT CCATCAAGGC CGTCGCCGCG CTGCGCAACC AGTTCGGTGG TCACGCCGTC GCGCAGGCCG GGCCCACCTC GGGCACGGGC TCCACGAACA GCTGA
|
Protein sequence | MHIGLVGLGK MGGNMRSRLR DKGIEVTGYD PNPDVTDVPS LAALVEALPS PKIVWVMVPS GKITRDTVAN LAPLLKDGDL VIDGGNSKWT DDEINSKLLA ERGTGYMDCG VSGGVWGKDN GYGLMVGGSK GHVDLAMPIF DALRPEGPRE EGFVHAGGVG AGHYSKMVHN GIEYGLMHAY AEGYELLEAK GIIHDVPAVF KAWTRGTVVR SWLLDLMVRA LEEDPKLDNI RGYAQDSGEG RWTLEQAIEN AVPMPVLAAA LFARFSSRQE DSPSIKAVAA LRNQFGGHAV AQAGPTSGTG STNS
|
| |