Gene Jden_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2238 
Symbol 
ID8381824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2427409 
End bp2428029 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content55% 
IMG OID645004997 
Productprotein of unknown function DUF47 
Protein accessionYP_003162177 
Protein GI256833450 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.746394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGC GCATCACACC GCGCGATACA TCCTTCTTCG ATCTTCTTGC CGAGCTCGCC 
AGCCACCTTG TGGTCGGTTC TCAACTCCTC GGCGAAATCC TCGGAGCATC CAAGGCCGAC
CGCAAAGCGA TCGGCAAAAA AATCAGCGAA GCTGAAAACG CCGCCGATGA CGTCACGCAC
ACCATCATGC GGCAACTGAA CTCCACGTTC GTTACCCCCC TTGACCGTGA TGACATTGCT
GGTCTGGCTT CAGCGCTTGA TGACTGCATG GACCACATGG AAGAAGCGGC TGACCTCATC
GTGTTGTACA AACTCGAAGA GATCCCGCGT AAAGTTTCTG ACCAGGTTTC GGTGTTGCAA
CGTTGTTCTG AACTCACCGC CGAAGCGATG CCACATTTGC GGCAAATGAA CGACCTGTCA
GAGTACTGGG TGGAGATTAA CCGCCTCGAA AACCAGGCAG ACAAAGCCCA CCGCAAACTC
CTGGCGCAAA TGTTCGACGA AGTCCAAGAC CCCATCCAAC TGATGAAAAT CAAAGAGGTC
GTCGAAACAC TCGAAACCGC CGCAGACGCG TTTGAAAAAG TCGCGAACAT GGTGGAGACC
ATCGCGCTCA AGGAGTCCTG A
 
Protein sequence
MRLRITPRDT SFFDLLAELA SHLVVGSQLL GEILGASKAD RKAIGKKISE AENAADDVTH 
TIMRQLNSTF VTPLDRDDIA GLASALDDCM DHMEEAADLI VLYKLEEIPR KVSDQVSVLQ
RCSELTAEAM PHLRQMNDLS EYWVEINRLE NQADKAHRKL LAQMFDEVQD PIQLMKIKEV
VETLETAADA FEKVANMVET IALKES