Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3480 |
Symbol | |
ID | 3935954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3533900 |
End bp | 3534625 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637905854 |
Product | ThiJ/PfpI |
Protein accession | YP_511422 |
Protein GI | 89055971 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.782484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC AATCCAAGAC CCACGTCCTG ATGCTGGTGT CCAACCCGGC AACATCGCCG GTCACACACT GGCCCATCGG CTTTTGGTGG GCCGAGCTGT CCCATGCCTG GATCGCCTTC AACGACGCGG GATACGATAT TACCGTGGCC TCACCCGGGG GCGGTGATCT GGCCGCGGAT ATGTGGAGCG ATCCGGAACA TGAAAGCGGC TACGCGGCCC ATGATATCAT CTCGCTCGGC TTCAAATCCT CGCCACTCAC CGCGCCTCTC CTTACGGAAA CCCCGGCGCT CGGGACGCTG AACATGAAGG ATTACGACGC GATTTTCATC GTCGGCGGGC AGGGGCCGAT GGTCACGATG GTGGACGACA CAGCGCTGCA CGAGACGCTC GCCGCGTTTT ACGAGACGGG CAAGATCCTT GCCGCCGTGT GCCATGGCAC CTGCGTTTTG CTGAAGACCA AGCTGTCGGG CGGCGATCTC CTGATCAAGG GCAAGACCTG GACCGGGTTT GCCAATTCCG AGGAACGGTA TTCGGAACAT GCCGCAGGCC AGAAGATCCA GCCCTTCTGG ATCGAGGATG AGGCGCGGAA GATCGAGGAT ACCAACTTCA TCACCGGCGG GCTTCTGGCT GAATTCGCTG TGCGGGACGG CAATCTGATC ACCGGGCAGC AACAGGTCTC CTCCGCCGCC ACGGCCCGCA AAGTCATCGC GGCACTTGGC GCATGA
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Protein sequence | MTDQSKTHVL MLVSNPATSP VTHWPIGFWW AELSHAWIAF NDAGYDITVA SPGGGDLAAD MWSDPEHESG YAAHDIISLG FKSSPLTAPL LTETPALGTL NMKDYDAIFI VGGQGPMVTM VDDTALHETL AAFYETGKIL AAVCHGTCVL LKTKLSGGDL LIKGKTWTGF ANSEERYSEH AAGQKIQPFW IEDEARKIED TNFITGGLLA EFAVRDGNLI TGQQQVSSAA TARKVIAALG A
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