Gene Jann_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1634 
Symbol 
ID3934082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1621520 
End bp1622071 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID637903985 
Productprohead peptidase 
Protein accessionYP_509576 
Protein GI89054125 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.457432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.754513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TTTCGTCAAG CGGACTGGAA GTAAAATTCC AGAGGTTCGA CAACGAACTG 
ACACTTGATG ACGAATTTGT CATCGAGGGC TATGCGTCGT TGTTTGGGGC TAAGGATCAG
GGCGGCGATG TCGTGGAAAA GGGGGCTTAT GCAAAGTCTC TAAATGCGGA TCGTCGGGTC
AAGATGCTTT GGCAGCATGA CCCGAATGAG CCCATCGGGA TCTGGGACGA GATTCGCGAA
GACGACCGTG GACTATACGT AAAAGGCCGC TTGCTGGAGT CGGTGTCGCG GGCCCGGGAA
GCTGCCGCGC TGACCAAGGC GGGCGCGATT GACGGGCTGT CTATCGGCTA CCGCACGATA
AAATCCCACA AGAACGAGAA AGGCGCGCGT TGCCTTTCCG AAGTGGAGCT TTGGGAGGTG
TCGCTTGTGA CATTCCCCAT GCTTCCCGAA GCGCGATTGG ATGCCCATGA GGGCAAATCA
AACGCGCTTC AAGACCTGGC GCAAGTGTTC GAGGACGCCC GCCTGACCCT GGCGGCCCGC
AAGGCCCGCT GA
 
Protein sequence
MKTISSSGLE VKFQRFDNEL TLDDEFVIEG YASLFGAKDQ GGDVVEKGAY AKSLNADRRV 
KMLWQHDPNE PIGIWDEIRE DDRGLYVKGR LLESVSRARE AAALTKAGAI DGLSIGYRTI
KSHKNEKGAR CLSEVELWEV SLVTFPMLPE ARLDAHEGKS NALQDLAQVF EDARLTLAAR
KAR