Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0442 |
Symbol | |
ID | 3932883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 445582 |
End bp | 446238 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637902787 |
Product | HAD family hydrolase |
Protein accession | YP_508384 |
Protein GI | 89052933 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACCTG ACCTTGTCAT CTTCGATTGC GATGGAGTGC TGGTGGACAG CGAGCCCTTG TCCAATCAGG TTACCGTCGA TGCGCTGGCA GACATGGGTA TTCACATGAG CCTGGACGAG ATTATGGCGA TGTTCGTTGG CAAGAGCATG GCTCAGGTTG CGGCCGGTGT GCGTGCCATG GGTGCACCAC TGCCCGGCTC GGATGCGGAG TGGATCGACA CCCTATATAC CGAGACCTAC GCGCGGCTGC GCCAAGGGGT GGATCCCATC CCCGGTGTCG TGGGCGTGCT TGACGCGTTG GACACCGCAG GCGTGCCCTA TTGCGTCGCG TCCAACGGGT CCGATGAGAA GATGGACATC ACCCTTGGCG GCACCGGCAT GGCGGAGCGT TTCAAGGGCA AACGGTTTTC CGCCCACACA TTGGGTGTGT CAAAACCGGA CCCGGAGTTG TTCTTCATCG CGGCGAAATA CATGAGCGTC GTGCCGTCGC GCGCGGTGGT GATCGAGGAC AGCCCATCGG GAGCGTTAGG CGCACAGCGG GCTGGGATGC GGTGCTTTGG CTATGCACCA GAGGGAGGGG ACGCTTTGGA AGAGGTGGGC GCACACGTCT TTCAATCCAT GAACGATCTA CCAGCCCTGC TCGGGATTAA GGACTAA
|
Protein sequence | MIPDLVIFDC DGVLVDSEPL SNQVTVDALA DMGIHMSLDE IMAMFVGKSM AQVAAGVRAM GAPLPGSDAE WIDTLYTETY ARLRQGVDPI PGVVGVLDAL DTAGVPYCVA SNGSDEKMDI TLGGTGMAER FKGKRFSAHT LGVSKPDPEL FFIAAKYMSV VPSRAVVIED SPSGALGAQR AGMRCFGYAP EGGDALEEVG AHVFQSMNDL PALLGIKD
|
| |