| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_2083 |
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| Symbol | |
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| ID | 5389593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1825032 |
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| End bp | 1825793 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640862937 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_001398988 |
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| Protein GI | 153951436 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000447983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATTA ATAAATTTAT ATCCCACAAC ACCCGCTATT CACGCCGTGA ATCTGATGAA
CTTATCAAGC AAGGCTTAGT AAAAATAAAC AACAAAATTG CCCTTTTAAG CGATGAAGTT
AAATTTGATG ATAAAGTCTT TGTTAAAGGT AAAAGAGTGC AAAAAAGAAC GCAATTTAGC
GTGTTAATCT ACCATAAACA AAAAGGCGAA ATTGTCAGTA AAAAAGACGA TCGTGGAAGA
AAAACTATAT ACGATACCTT GCCAAGACAA TTTAGCACTT GGCTTAGTGT AGGCAGACTG
GATTATGCAA GCGAAGGCTT GCTTTTGCTT ACAGATTCTC CTGTGATTGC CGATGTTTTA
ATGCATAGTG ATTTAGAAAG AGAATACTAT CTTAAAGTTA AAGGTACGGT GAGCAAACAA
GTCATCGAAG CAATGCAAAA TGGACTTGAG ATTAAAAATG AAAAAAAAGG CGCACACGCA
AAAACTAAAA TCACTTCTAT GAGTTTTGCT CCTTTTATAG ACTTTGAAAT TTTTGGATCA
AGCGGAGGTT ATACCAAGCT TAGAGTGGTT ATAAATGAAG GTAAAAATAG AGAGCTTAGA
CGCTTTTTTG GACATTTTGA TCTTGAAGTC ATGGATCTTA AGCGTGTTGC TTTTGGAGCT
TTAGATCTTG GTATGTTAAA GGTGGGAAAA CATCGTTATT TAGAAAATGG CGAATATGAA
AAATTAAGAG ATTTTTTGAA ATTTAATGAA ATAAGATATT GA
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| Protein sequence | MRINKFISHN TRYSRRESDE LIKQGLVKIN NKIALLSDEV KFDDKVFVKG KRVQKRTQFS
VLIYHKQKGE IVSKKDDRGR KTIYDTLPRQ FSTWLSVGRL DYASEGLLLL TDSPVIADVL
MHSDLEREYY LKVKGTVSKQ VIEAMQNGLE IKNEKKGAHA KTKITSMSFA PFIDFEIFGS
SGGYTKLRVV INEGKNRELR RFFGHFDLEV MDLKRVAFGA LDLGMLKVGK HRYLENGEYE
KLRDFLKFNE IRY
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