| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1779 |
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| Symbol | kpsD |
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| ID | 5388792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | - |
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| Start bp | 1564619 |
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| End bp | 1566277 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640862673 |
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| Product | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein |
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| Protein accession | YP_001398734 |
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| Protein GI | 153951855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTAATTTT ATTTTTTAGT TGTATTTTAT GTTTTGGAGC TGTGGATGTT
TCACAAATCA TTGCCTCAGA GGAGCAAACT TCCCGCACAG CGACTATGGA ACAAATTTTA
AGCTCAAATT ATGATACAGC AAATAAAGAA AATAATCTTA CAAAGATTCA TCAAATTTTA
GTATTTGGTG CTCATCTTTT TAATGGAAAT TTTAAAAATT ACAATCAAAG AGTTTATAAC
CCAGATTATA AGATCGCAGT TGGTGATCAA ATCAGTCTTA AAATTTGGGG AGCTGTTGAG
TTTTCACAAG TTTTAGTGGT AGATTCTCAA GGAAATATTT TTATCCCTAA AGTAGGAGCT
GTAAATTTAC TAGGCGTGAA AAATAGCGCC CTTGTAAGTG TTATAAAAGC GCGTGTTAAT
AAAATTTATA AAAGTAATGT TTTTGTTTAT GCAGATATGA ATGCTTATCA AAATGTCAGT
GTTTTTGTAA CAGGAAGCGT TAATGCTCCA GGACTTTATC AAGGACTTAG TTCGGATTCA
GTGATACAGT ATCTTGATAA AGCAGGGGGT ATAAATTTAG AATATGGAAG TTTTAGAGAT
ATTCAAATTT TGCGCAATAA CAGCGTGATA AAAAATATCG ATTTATATGA TTTTTTGCTA
AAAGGGCAAA TGTATCTTTT TCCTTTTAGA AGTGGAGATG TTATCTTAGT AGGAAATGTT
CAAAATTACG CTTTTGTTGA TGGTGATGTG CAAAGACCTT TTCGTTTTGA ACTTTCAAAT
GATATTAAAA CTTTAGCTGA CTTAGCTAGA GTATCAGGTG CTAAACCTAT TGTAACTAAT
GCTATCGTAA AAAGTTATGG TGAAGATCAT AAACTTGATG TCAGTGCTTA TAATAAAATG
CAATTTTCAA AAGTTTTACT TAGAACGGGA GATGAGGTAG AATTTCACCC TGAGTATGTT
TCTGAAAATA TAACTATAAG TGTAAATGGC GAGCATAATG GTTTAAAAAC TTTAGTTGTG
GGTAAAGGAA CGACTTTAGA AGATATTTCT AAACTAATCA AGGCTAACCC GCAATCAAAT
ATGCAAGCTT TACAGGTATT TAGAAAAAGT GTAGCTAGAA CTCAAAAAGA ACTTATCAAT
GCTCAGCTTA AAGAGCTTGA AACTCTAGCT TTAACCAGCA GTTCTGTTAC GGCTCAAGGC
GCAGCTATAA GAGCTCAACA AGCAAAAACG ATTTTAGAAT TTATCCAAAG AGCTAAGCAA
GTAGAGCCTA AAGGCCAAAT TGTCATCGAT AATCCAAAAT CTTATAATTC GGTTATTTTA
GAAGATGGCG ATACTATCAG TGTGCCAAGT AAAAATAATC TTATCATAAT TCAAGGCGAA
GTCTCTTTAC CCGGGGCTTT TTTGTATGAT AAAGGGAAAG ATTTAAGATA TTATATCAAT
CTTGCAGGAG GTTATGGAGA AAGAGCGGAT ACTTCAAAAG TTTTGGTGAT ACGAAGCAAT
GGAAAAGCTG AAAAATATCA TAGCGGTATA GATATGAAAC CAGGCGATTC TGTGTTGGTA
TTGCCAAAAG TAGATAGTGA GAATTTGCAA ATTTTTTCAA TGTTAACTCA AATTCTTTAT
CAAATTGCTG TTGCAACCAA TGTTGTGCTT AATCTTTAA
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| Protein sequence | MKKILILFFS CILCFGAVDV SQIIASEEQT SRTATMEQIL SSNYDTANKE NNLTKIHQIL
VFGAHLFNGN FKNYNQRVYN PDYKIAVGDQ ISLKIWGAVE FSQVLVVDSQ GNIFIPKVGA
VNLLGVKNSA LVSVIKARVN KIYKSNVFVY ADMNAYQNVS VFVTGSVNAP GLYQGLSSDS
VIQYLDKAGG INLEYGSFRD IQILRNNSVI KNIDLYDFLL KGQMYLFPFR SGDVILVGNV
QNYAFVDGDV QRPFRFELSN DIKTLADLAR VSGAKPIVTN AIVKSYGEDH KLDVSAYNKM
QFSKVLLRTG DEVEFHPEYV SENITISVNG EHNGLKTLVV GKGTTLEDIS KLIKANPQSN
MQALQVFRKS VARTQKELIN AQLKELETLA LTSSSVTAQG AAIRAQQAKT ILEFIQRAKQ
VEPKGQIVID NPKSYNSVIL EDGDTISVPS KNNLIIIQGE VSLPGAFLYD KGKDLRYYIN
LAGGYGERAD TSKVLVIRSN GKAEKYHSGI DMKPGDSVLV LPKVDSENLQ IFSMLTQILY
QIAVATNVVL NL
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