Gene Hore_01340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01340 
Symbol 
ID7313261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp144277 
End bp144777 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content43% 
IMG OID643610556 
Productribosomal protein S5 
Protein accessionYP_002507890 
Protein GI220930982 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.162816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA TTGATCCCGA TAAACTGGAT TTAGAAGAAC GTGTTGTTAA TATTAACAGG 
GTAGCAAAAG TAGTAAAAGG TGGCCGTAGA TTTAGCTTCA GTGCTCTGGT TGTTGTTGGA
GATGGCAACG GGCATGTCGG GGTTGGCTTT GGTAAGGCTA ACGAAGTCCC TGAAGCCATC
CGCAAGGGTG TTGAAGACGG TAAAAAGAAT TTAATCAAGG TACCTATCGT TAACACAACA
ATTCCACACG AAATCGTAGG AGAATTTGGA GCCGGAAAAG TGTTATTAAA ACCTGCTGCT
CCCGGTACTG GTGTTATTGC CGGTGGCCCT GTCAGGGCGG TAGTTGAGCT GGCTGGAATT
GGAGATATTC TCACTAAATC TTTAGGATCC AGTAACCCCA TCAATATGGT TAAAGCAACT
TTGACCGGAC TTAGTCAGCT TAAAACCATT GAAGAAGTGG CCGATTTAAG AGGTAAAGAT
GTAGAAGAAT TAATGGGCTA A
 
Protein sequence
MKNIDPDKLD LEERVVNINR VAKVVKGGRR FSFSALVVVG DGNGHVGVGF GKANEVPEAI 
RKGVEDGKKN LIKVPIVNTT IPHEIVGEFG AGKVLLKPAA PGTGVIAGGP VRAVVELAGI
GDILTKSLGS SNPINMVKAT LTGLSQLKTI EEVADLRGKD VEELMG