| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_01000 |
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| Symbol | |
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| ID | 7314322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 118418 |
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| End bp | 119065 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610522 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_002507856 |
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| Protein GI | 220930948 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000000027918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGGGAA ATGCACAGGA AAAATATGAT TATGAAGATT ATAATCAATT GGGGGATGAG
GAGTTAGTAG AATTAGTCCA TAAGGGAGAT AAAATAGCTG AAGAAACACT GATAAAGAGA
TATAAAAATT TTGTCCTGGC CAAGTCTAGG TCTTATTTTT TGGTAGGAGC AGATAGAGAA
GACATTGTCC AGGAAGGAAT GATTGGGTTA TATAAAGCTA TTAGAGACTA TAAGGTTGAT
AGACTGGCTT CTTTCCGGGC TTTTGCTGAA TTATGCATTA CCCGGCAGAT TATTACAGCT
ATTAAAGCAG CTACCCGCCA GAAGCATCAG CCGTTAAATT CTTACGTTTC CTTAAACCGC
CCTATTTATG ATGAAGAATC GGACCGGACC CTGCTGGATG TTCTAAATGG GGGAAAGCTT
TCCGATCCTG AAGAACTTTT TGTGAGCAAG GAAACCTATA ATTTAATTGA AAATAAAATT
ACTGAAATGC TTAGCCAGCT GGAATTAAAT GTTCTCCAGG AATATCTTGA AGGCAAATCA
TACCAGGATA TAGCCGAAAG TTTAGACAAG CACGTGAAAT CAGTTGATAA TGCACTTCAG
CGGGTTAAGA GAAAGCTGGA AATTTTCCTG GAGAAACATA ATATTTAA
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| Protein sequence | MKGNAQEKYD YEDYNQLGDE ELVELVHKGD KIAEETLIKR YKNFVLAKSR SYFLVGADRE
DIVQEGMIGL YKAIRDYKVD RLASFRAFAE LCITRQIITA IKAATRQKHQ PLNSYVSLNR
PIYDEESDRT LLDVLNGGKL SDPEELFVSK ETYNLIENKI TEMLSQLELN VLQEYLEGKS
YQDIAESLDK HVKSVDNALQ RVKRKLEIFL EKHNI
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