Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00900 |
Symbol | |
ID | 7314312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 109298 |
End bp | 109828 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643610512 |
Product | transcriptional regulator, CarD family |
Protein accession | YP_002507846 |
Protein GI | 220930938 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 8.92061e-17 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATG AAGAGGGGTT GATTAACAAG ATGTTTAAAG TTGGTGACAA AGTAGTATAT CCCAATCATG GGGCTGGTAC GATAGTCGGT ATAGAGACCA AAAATATTCT GGGAGAAGAG AAAAAATATT ATATCATGAA ATTGCCGATC GGGGATATGA AGGTTATGAT TCCGGTTGAA AAAGTTGAAG AGATTGGAGT CAGGAACATT ATCGACGAGG AAGAGGCCGA TAATGTTTTA AAGTTATTAA AAGGCGATAA AAGTAAGATG TCACAGAACT GGAACCGGCG TTACCGGGCC AATATGGAAA AATTGAAGAC CGGTGATATA TATGAGGTTG GGGAAGTTGT CAGGAATCTG ACCATCCGCG ACCATGAAAA AGGTTTATCT ACCGGTGAGA AAAAAATGTT AAGTAATGCC CGCCAGATTT TAATAAGTGA ACTGGTTTTG GCCAAGGATA TGGATGAAAA AGAAGTTGAA GAAATAATCG ACAATGTTTT TGAAGAAAAT CCCAATCTTG ATGAAGAGTA A
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Protein sequence | MANEEGLINK MFKVGDKVVY PNHGAGTIVG IETKNILGEE KKYYIMKLPI GDMKVMIPVE KVEEIGVRNI IDEEEADNVL KLLKGDKSKM SQNWNRRYRA NMEKLKTGDI YEVGEVVRNL TIRDHEKGLS TGEKKMLSNA RQILISELVL AKDMDEKEVE EIIDNVFEEN PNLDEE
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