Gene Hoch_6458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6458 
Symbol 
ID8548875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8867690 
End bp8870254 
Gene Length2565 bp 
Protein Length854 aa 
Translation table11 
GC content68% 
IMG OID646391121 
Productleucyl-tRNA synthetase 
Protein accessionYP_003270820 
Protein GI262199611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAT ACGATCACCG CGAAATCGAC GCCAAGTGGC AGGCCCTGTG GCGCGACGAA 
GACCTCTTCG CCACGCCCGA GGACCGCACC AAGCCCAAAT TTTACATCCT CGACATGTTC
CCCTACCCCA GCGGGGCCGG GTTGCACGTC GGTCATCCCA AGGGCTACGT GGCCACCGAT
GTGGTCGCGC GCGCCAAGCG GATGATGGGA TTCAACGTGC TGCACGTGAT GGGCTGGGAC
TCCTTCGGTC TGCCCACCGA GCGCCAGGCC GTGCGCGAGG GGCGCTCGCC GGCCGAGATC
ACGGCGCGCA ACGTCGGCCG CTTCAAGGAG CAGCTCGAGA ATCTCGGACT GTCGTACGAC
TGGTCGCGCG AGCTGGCGAC CTCGGACGAG GCCTACTACC GCTGGACGCA GTGGATTTTC
CTCAAACTGT ACGAAAAAGG CCTGGCCTAT CAGGCCGAGG TGGCCGTGAA CTGGTGCCCG
GCGCTGGGCA CGGTATTGGC CAACGAGGAG GTCCAGGACG GCAAGTACGT CGAGACCGGG
GATCCGGTCG AGCGCCGCAG CATGAAGCAG TGGATGCTGC GCATCACGGC CTACGCCGAC
CGTCTGCTCG ACGGCCTCGA GGATCTCGAC TGGCCCGAGG GCATCAAGGA GATGCAGCGC
CACTGGATCG GGCGCTCGCG CGGCGCCGAG ATCGACTTCG CGGTCGAGAA CCACGAGGGC
GACCACGACG GCGACGCGAT CCGCGTGTTC ACCACCCGGC CGGATACGCT CTTTGGCTGC
ACCTACGTGG TGCTGGCGCC CGAGCACGAG CTGGTCGCCA AGATCACCAC CGAGGCCCAG
CGCGAGGCCG TGAACGCGTA CTGTGACGAG GTCGCCGGCC GCTCCGAGCG CGACCGCACC
ACCGAGGCCG CCGACGCCGA CAAGACCGGC GTGTTCACCG GCGCCTACGC GCGCAATCCG
GCCAACGGGG CCAAGGTTCC GATCTGGATC GCCGACTACG TGCTGGCCAG CTACGGCACC
GGCGCGGTGT TCGCGTGCCC GGCGCACGAC GAGCGCGACC ACGCCTTCGC CAAGAAGTTC
GAGCTGCCCA TCATCGAGGT GGTCGAGGGC GGCTCGGTCG ACGAGGCCGC GTACACGGGC
GACGGCGCCC ACCTGCGCTC CGAGTTCCTC GACGGCCTCG ACATCGCCGC GGCCAAGCAG
CGCATCATCG CGTTTCTCGA GGAGAAGGGC TGCGGCGAGG GCGTGGTCCG CTACCGCCTG
CGCGACTGGC TGTTCTCGCG CCAGCGCTAC TGGGGCGAGC CGTTCCCGAT CATCGAGCTC
GAGGACGGCA CGGTCAAGCC GCTGCCCGAG AGCGAGCTGC CGGTGAAGCT GCCGCCGCTC
GACGAGTACA AGCCGACCGA GGACGGCCGG CCGCCGCTGG CCCGCGCCGA GGACTGGGTG
CAGACCAAGG ATCCCGAGAC CGGCGCGCCC GCGCAGCGCG AGACCAACAC CATGCCGCAG
TGGGCGGGAT CGTGCTGGTA CTACCTGCGC TTCATCACGC CCAAGCTCGA CACCGCGGCC
TGGGATCCGG GCGAGGAGCG CTACTGGATG CCGGTCGACC TGTACGTCGG CGGCGCCGAG
CACGCCACCC TGCACCTGCT CTACAGCCGC TTCTGGCACC ACGTGCTCTA CGATCTCGGC
CTGGTGAGCA CGCCCGAGCC GTTTCAGCGT TTGTTCAACC AGGGCATGAT CCACCGGACC
TCGTACCGCG ACGCGGCGGG CAAGTACTAC TACGAGGAAG AGGTCGACAA GCGCGGCGAC
AGCTACGTGG CCAAGGCCGA CGGCACCGAG GTCTTCCCCA AGCTCGAGAA GATGTCGAAG
TCGAAGTACA ACGTCGTCAA CCCCGACGAC ATGTGCGCCG AGTACGGGGC CGACGCGCTG
CGCCTCTACG AGCTGTTCAT GGGCCCGCTC GAGGACGGCT GCGAGTGGGA GACCGCGGGC
GTCGCCGGCA CTCGCCGCTT TCTCGACCGC CTGTACCGAC TGGTCGTCGA CACCGACTCG
GACAGCGGGA CGGAATCCGA CAAGCTGGCC AGCAAGCTGG TGGACGAGGA CACCGACGAC
CGTGAGCTCG AGCGCGCGCT GCACGCGGCC ATCAAGAAGG TGAGCGAGGC CATCGAGTCG
CTGCGCTTCA ACACCGCCGT CTCCGAGATG ATGATGTTTG TCAACGAGGC GACCAAGGCC
GAGCGCGTGC CCAAGGCGTG GATGGAGACG TTCGTGCGCG TGCTGGCGCC CTTTGCCCCG
CACCTGGGCG AGGAGCTGTG GCGGCGCCTG GGTCACGAGG ACAGCCTGGT GTACGCGCCC
TGGCCGGCCT ACGAGGAGGC CAAGCTGGTC GCCGACACCA TCACGCTCGC GGTCCAGGTC
AACGGCAAGC TGCGCAGCAC CCTGGAGGTG CCGGCCGACA TCGGCAAAGA CGACGCCATC
GCCCAGGCCA AGAGCGACGA CAAAGTGGCC AAGTTCCTCG AGGGCAAGAC CCTGCGCCGC
GAGATCTACG TTCCCGGACG CCTGGTCAAT CTGGTCGCCA ACTAG
 
Protein sequence
MAGYDHREID AKWQALWRDE DLFATPEDRT KPKFYILDMF PYPSGAGLHV GHPKGYVATD 
VVARAKRMMG FNVLHVMGWD SFGLPTERQA VREGRSPAEI TARNVGRFKE QLENLGLSYD
WSRELATSDE AYYRWTQWIF LKLYEKGLAY QAEVAVNWCP ALGTVLANEE VQDGKYVETG
DPVERRSMKQ WMLRITAYAD RLLDGLEDLD WPEGIKEMQR HWIGRSRGAE IDFAVENHEG
DHDGDAIRVF TTRPDTLFGC TYVVLAPEHE LVAKITTEAQ REAVNAYCDE VAGRSERDRT
TEAADADKTG VFTGAYARNP ANGAKVPIWI ADYVLASYGT GAVFACPAHD ERDHAFAKKF
ELPIIEVVEG GSVDEAAYTG DGAHLRSEFL DGLDIAAAKQ RIIAFLEEKG CGEGVVRYRL
RDWLFSRQRY WGEPFPIIEL EDGTVKPLPE SELPVKLPPL DEYKPTEDGR PPLARAEDWV
QTKDPETGAP AQRETNTMPQ WAGSCWYYLR FITPKLDTAA WDPGEERYWM PVDLYVGGAE
HATLHLLYSR FWHHVLYDLG LVSTPEPFQR LFNQGMIHRT SYRDAAGKYY YEEEVDKRGD
SYVAKADGTE VFPKLEKMSK SKYNVVNPDD MCAEYGADAL RLYELFMGPL EDGCEWETAG
VAGTRRFLDR LYRLVVDTDS DSGTESDKLA SKLVDEDTDD RELERALHAA IKKVSEAIES
LRFNTAVSEM MMFVNEATKA ERVPKAWMET FVRVLAPFAP HLGEELWRRL GHEDSLVYAP
WPAYEEAKLV ADTITLAVQV NGKLRSTLEV PADIGKDDAI AQAKSDDKVA KFLEGKTLRR
EIYVPGRLVN LVAN