Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5556 |
Symbol | |
ID | 8547970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7624478 |
End bp | 7626013 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646390229 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_003269931 |
Protein GI | 262198722 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.564803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGC GGGGGCAGCA CTTCCTGGCA CCCTCGCGCG CATCCGACCC GGCGCGCCGT CGGCGTATCG TCGCCAGACG CGTCAACCCT TTGCACCGTC TCGCGGCCGT GGTAAGCGTT GCCGCCGTGT GTGGAATCTT TGGCATCTAC GGGCACGACG AAGCCGCTAA CATCGCTTAC CTGGGGCTGC ATTCGCTGCA GCACCGCGGT CAGGAATCCG CCGGCATCGT CGCCGCGGGG CCCAGCGGAT TGCGTCGGCA GGCGGCCATG GGATTGGTCT CCGATGCCTT CGACCGCATG CGCCTGGGCC ACCTGCCGGG CCGCGCGGCC ATCGGTCAGG TGCGCTACTC GACCACGGGA AACTCCGAGT TGCGCAACGC GCAGCCGTTT TTGTTCGAGT ACGCCCACGG CTCCATCGCC ATCGCCCACA ACGGCAATCT GCTCGACTCG GCCGATCAGC GCACCGCGCT CGAGCGCGAT GGCTCGATCT TTCAGACCTC GAGTGACACC GAGGTGATCG TCCATCTGCT GGCCCGTTCT CGCGTCGAGA CGACCGTGGA GCGCTTGCGT TCGGCCTTGG CCCAGGTGCG CGGCGCCTAT TCGCTGGTGG TGCTCACCGA GCGCGCGCTC ATCGCCGCGC GCGATCCCCA CGGCGTGCGG CCCCTGTGCC TGGGTCGGCT CAAAGACGCC TACGTGCTGT CCTCGGAGAC CTCGTCCTTC GACCTGATCG AGGCCGAGTT CATCCGCGAG CTCGAGCCCG GCGAGATGGT GGTCATCGAC GACAGCGGCC TGCGCTCGCT GTCGGTGTCC GAGCGCGCCG CCGAGGCGCC CGAGCCGCGC CGCTTCTGCG TGTTCGAGCA CGTCTACTTC GCGCGCCCCG ACAGCCTCGT CGACAGCCAG TCCGTGTATC GCTGTCGCGA GAGCCTGGGG CGTCAGCTCG CGCGCGAGCA GCCGGCCGAG GCCGACGTCG TCATCCCGGT GCCCGACTCC GGCGTGGCCG CCGCCATCGG CTTCGCGCGC GAGGCCGGGC TCACCTATGA GATGGGCCTG ATCCGCTCGC ACTACGTGGG CCGCACCTTC ATCGAGCCCC AGGACTCCAT CCGTCACTTC GGCGTGCGCC TCAAGCTCAG CCCGGTGCGC TCCGTGGTCG ATGGCAAGCG CGTGGTCGTG GTCGACGACT CGCTCGTGCG CGGCACCACC TCGCGCAAGA TCGTCAAGAT GCTGCGCGCG GCCGGCGCGC GCGAAGTGCA CCTGCGCATC GCCGCGCCGC CGACCACCCA TCCCTGCTTC TACGGCATCG ACACCCCGAC CCGTTCGGAG CTGATCGCGT CCTCGCATTC CCCCGCGGAA GTGGCCCGCT ACGTCACCTG CGACTCGCTC GGCTACCTAT CGCACGCGGG CATGATGCAG GCGCTCGGCT CCGACGCCCA GGGGACCGGC TATTGCTCGG CGTGCTTCAC GGGCGTATAT CCGATAGCCT TGAACCTCAA CCGGCCGCGC GAGAGCGGCT CCCCGCAGGA GACATCCGAT GAGTGA
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Protein sequence | MYKRGQHFLA PSRASDPARR RRIVARRVNP LHRLAAVVSV AAVCGIFGIY GHDEAANIAY LGLHSLQHRG QESAGIVAAG PSGLRRQAAM GLVSDAFDRM RLGHLPGRAA IGQVRYSTTG NSELRNAQPF LFEYAHGSIA IAHNGNLLDS ADQRTALERD GSIFQTSSDT EVIVHLLARS RVETTVERLR SALAQVRGAY SLVVLTERAL IAARDPHGVR PLCLGRLKDA YVLSSETSSF DLIEAEFIRE LEPGEMVVID DSGLRSLSVS ERAAEAPEPR RFCVFEHVYF ARPDSLVDSQ SVYRCRESLG RQLAREQPAE ADVVIPVPDS GVAAAIGFAR EAGLTYEMGL IRSHYVGRTF IEPQDSIRHF GVRLKLSPVR SVVDGKRVVV VDDSLVRGTT SRKIVKMLRA AGAREVHLRI AAPPTTHPCF YGIDTPTRSE LIASSHSPAE VARYVTCDSL GYLSHAGMMQ ALGSDAQGTG YCSACFTGVY PIALNLNRPR ESGSPQETSD E
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